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Achievement: QuickdrawAchievement: Pull Sharkx2Achievement: Arctic Code Vault Contributor

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@ssi-dk
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kalilamali/README.md

Hi there 👋

  • 👩‍💻 I'm a Bioinformatician working on bacterial genomics.

My stack is:

Python R BASH MatLab SQLite Github Docker Conda Snakemake Visual Studio Code Linux Apple PyTorch Vim Flask Streamlit Jupyter RStudio Bioconductor Pandas Scikit-learn SciPy Latex

Pinned Loading

  1. conda_ci_github_actions_demo conda_ci_github_actions_demo Public

    This is a demo repo for CI and CD for conda environments using GitHub actions.

    Python

  2. Integrons Integrons Public

    Integron analysis tools. Scripts necessary to reproduce the validation of IntFinder (version 1.0).

    Python

  3. ssi-dk/cdiff_fbi ssi-dk/cdiff_fbi Public

    Typing of Clostridioides difficile isolates using NGS data (reads and contigs) based on tandem repeat loci (TR6, TR10), and toxin genes (cdtA, cdtB, tcdA, tcdB, tcdC).

    ASP.NET

  4. approval_tests_python_demo approval_tests_python_demo Public

    This is a demo repo for testing in python using ApprovalTests.Python

    Makefile

  5. drawio_github_demo drawio_github_demo Public

    This a demo repo for diagrams in GitHub using draw.io

    HTML

  6. codespaces-demo codespaces-demo Public

    This is a demo repo for CI and CD using GitHub codespaces and GitHub actions.

    Makefile