Non-functional attempt to address issue DiODeProject#158

jarmarshall · Oct 11, 2018 · d9095f7 · d9095f7
1 parent 87307e5
commit d9095f7
Showing 1 changed file with 111 additions and 8 deletions.
diff --git a/setup.py b/setup.py
@@ -28,15 +28,118 @@
     package_data={'mumot.gen': ['PS.tokens', 'PSLexer.tokens']},
     license='GPL-3.0',
     install_requires=[
+        'alabaster==0.7.11',
         'antlr4-python3-runtime==4.5.3',
-        'graphviz',
-        'ipython',
-        'ipywidgets',
-        'matplotlib<3.0',  # see https://github.com/DiODeProject/MuMoT/issues/171
-        'networkx',
-        'pydstool',
-        'scipy<1.0.0',  # see https://github.com/DiODeProject/MuMoT/issues/63
-        'sympy >= 1.1.1, < 1.3'  # see https://github.com/DiODeProject/MuMoT/issues/170
+        'atomicwrites==1.1.5',
+        'attrs==18.1.0',
+        'Babel==2.6.0',
+        'bleach==2.0.0',
+        'certifi==2018.4.16',
+        'chardet==3.0.4',
+        'colorama==0.3.9',
+        'coverage==4.5.1',
+        'cycler==0.10.0',
+        'decorator==4.1.2',
+        'docutils==0.14',
+        'entrypoints==0.2.3',
+        'fastcache==1.0.2',
+        'gitdb2==2.0.4',
+        'GitPython==2.1.11',
+        'gmpy2==2.0.8',
+        'graphviz==0.8.2',
+        'html5lib==1.0.1',
+        'idna==2.7',
+        'imagesize==1.0.0',
+        'ipykernel==4.6.1',
+        'ipython==6.2.1',
+        'ipython-genutils==0.2.0',
+        'ipywidgets==7.0.5',
+        'jedi==0.11.1',
+        'Jinja2==2.10',
+        'jsonschema==2.6.0',
+        'jupyter==1.0.0',
+        'jupyter-client==5.2.2',
+        'jupyter-console==5.2.0',
+        'jupyter-contrib-core==0.3.3',
+        'jupyter-contrib-nbextensions==0.5.0',
+        'jupyter-core==4.4.0',
+        'jupyter-highlight-selected-word==0.1.1',
+        'jupyter-latex-envs==1.4.4',
+        'jupyter-nbextensions-configurator==0.4.0',
+        'lxml==4.2.1',
+        'MarkupSafe==1.0',
+        'matplotlib==2.0.2',
+        'mistune==0.8.3',
+        'more-itertools==4.3.0',
+        'mpmath==0.19',
+        'nbconvert==5.3.1',
+        'nbdime==1.0.2',
+        'nbformat==4.4.0',
+        'nbval==0.9.1',
+        'networkx==1.11',
+        'notebook==5.4.0',
+        'numpy==1.13.1',
+        'packaging==17.1',
+        'pandocfilters==1.4.1',
+        'parso==0.1.1',
+        'path.py==11.0.1',
+        'pathlib2==2.3.2',
+        'pexpect==4.3.1',
+        'pickleshare==0.7.4',
+        'pluggy==0.7.1',
+        'prompt-toolkit==1.0.15',
+        'ptyprocess==0.5.2',
+        'py==1.5.4',
+        'PyDSTool==0.90.2',
+        'Pygments==2.2.0',
+        'pyparsing==2.2.0',
+        'pytest==3.7.1',
+        'pytest-cov==2.5.1',
+        'python-dateutil==2.6.1',
+        'pytz==2017.2',
+        'PyYAML==3.12',
+        'pyzmq==16.0.2',
+        'qtconsole==4.3.1',
+        'requests==2.19.1',
+        'scipy==0.19.1',
+        'Send2Trash==1.4.2',
+        'simplegeneric==0.8.1',
+        'six==1.10.0',
+        'smmap2==2.0.4',
+        'snowballstemmer==1.2.1',
+        'Sphinx==1.7.6',
+        'sphinx-rtd-theme==0.4.1',
+        'sphinxcontrib-websupport==1.1.0',
+        'sympy==1.1.1',
+        'terminado==0.8.1',
+        'testpath==0.3',
+        'tornado==4.5.3',
+        'traitlets==4.3.2',
+        'urllib3==1.23',
+        'wcwidth==0.1.7',
+        'webencodings==0.5',
+        'widgetsnbextension==3.0.8'
+        # 'antlr4-python3-runtime==4.5.3',
+        # 'graphviz',
+        # 'matplotlib<3.0',  # see https://github.com/DiODeProject/MuMoT/issues/171
+        # 'networkx',
+        # 'pydstool',
+        # 'scipy<1.0.0',  # see https://github.com/DiODeProject/MuMoT/issues/63
+        # 'sympy >= 1.1.1, < 1.3',  # see https://github.com/DiODeProject/MuMoT/issues/170
+#        'ipykernel==4.6.1', # see https://github.com/DiODeProject/MuMoT/issues/158 for this and following dependencies
+#        'ipython==6.2.1',
+#        'ipython-genutils==0.2.0',
+#        'ipywidgets==7.0.5',
+#        'jupyter==1.0.0',
+#        'jupyter-client==5.2.2',
+#        'jupyter-console==5.2.0',
+#        'jupyter-contrib-core==0.3.3',
+#        'jupyter-contrib-nbextensions==0.5.0',
+#        'jupyter-core==4.4.0',
+#        'matplotlib==2.0.2',
+#        'notebook==5.4.0',
+#        'tornado==4.5.3',
+#        'widgetsnbextension==3.0.8'
         ],
     extras_require={
         'test': [