re-ran all notebooks outputs to see if that fixes myst-nb docs issue

infer-actively · Aug 24, 2022 · 5b5b6db · 5b5b6db
1 parent c60a377
commit 5b5b6db
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Showing 6 changed files with 263 additions and 242 deletions.
diff --git a/docs/notebooks/active_inference_from_scratch.ipynb b/docs/notebooks/active_inference_from_scratch.ipynb
diff --git a/docs/notebooks/free_energy_calculation.ipynb b/docs/notebooks/free_energy_calculation.ipynb
@@ -26,7 +26,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 22,
+   "execution_count": 39,
    "metadata": {},
    "outputs": [],
    "source": [
@@ -44,7 +44,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 23,
+   "execution_count": 40,
    "metadata": {},
    "outputs": [],
    "source": [
@@ -78,7 +78,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 24,
+   "execution_count": 41,
    "metadata": {},
    "outputs": [],
    "source": [
@@ -93,7 +93,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 25,
+   "execution_count": 42,
    "metadata": {},
    "outputs": [
     {
@@ -167,7 +167,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 26,
+   "execution_count": 43,
    "metadata": {},
    "outputs": [
     {
@@ -216,7 +216,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 27,
+   "execution_count": 44,
    "metadata": {},
    "outputs": [
     {
@@ -267,7 +267,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 28,
+   "execution_count": 45,
    "metadata": {},
    "outputs": [],
    "source": [
@@ -285,7 +285,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 29,
+   "execution_count": 46,
    "metadata": {},
    "outputs": [
     {
@@ -327,7 +327,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 30,
+   "execution_count": 47,
    "metadata": {},
    "outputs": [
     {
@@ -388,7 +388,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 31,
+   "execution_count": 48,
    "metadata": {},
    "outputs": [
     {
@@ -447,7 +447,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 32,
+   "execution_count": 49,
    "metadata": {},
    "outputs": [
     {
@@ -501,7 +501,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 33,
+   "execution_count": 50,
    "metadata": {},
    "outputs": [
     {
@@ -546,7 +546,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 34,
+   "execution_count": 51,
    "metadata": {},
    "outputs": [],
    "source": [
@@ -566,7 +566,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 35,
+   "execution_count": 52,
    "metadata": {},
    "outputs": [],
    "source": [
@@ -620,7 +620,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 36,
+   "execution_count": 53,
    "metadata": {},
    "outputs": [],
    "source": [
@@ -653,7 +653,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 37,
+   "execution_count": 54,
    "metadata": {},
    "outputs": [
     {
@@ -662,7 +662,7 @@
        "Text(0.5, 1.0, 'Gradient descent on VFE')"
       ]
      },
-     "execution_count": 37,
+     "execution_count": 54,
      "metadata": {},
      "output_type": "execute_result"
     },
@@ -691,7 +691,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 38,
+   "execution_count": 55,
    "metadata": {},
    "outputs": [
     {

diff --git a/docs/notebooks/global.db b/docs/notebooks/global.db
diff --git a/docs/notebooks/pymdp_fundamentals.ipynb b/docs/notebooks/pymdp_fundamentals.ipynb
@@ -22,7 +22,7 @@
     },
     {
       "cell_type": "code",
-      "execution_count": null,
+      "execution_count": 1,
       "metadata": {},
       "outputs": [],
       "source": [
@@ -77,7 +77,7 @@
     },
     {
       "cell_type": "code",
-      "execution_count": 1,
+      "execution_count": 2,
       "metadata": {
         "id": "oDMlGXnQRuQv"
       },
@@ -162,7 +162,7 @@
     },
     {
       "cell_type": "code",
-      "execution_count": 2,
+      "execution_count": 3,
       "metadata": {
         "id": "naD3NKPjbeMg"
       },
@@ -171,7 +171,7 @@
           "name": "stdout",
           "output_type": "stream",
           "text": [
-            "[0.45187265 0.54812735]\n"
+            "[0.53712305 0.46287695]\n"
           ]
         }
       ],
@@ -211,7 +211,7 @@
     },
     {
       "cell_type": "code",
-      "execution_count": 3,
+      "execution_count": 4,
       "metadata": {
         "id": "Gtr7VPjlhxIl"
       },
@@ -267,7 +267,7 @@
     },
     {
       "cell_type": "code",
-      "execution_count": 4,
+      "execution_count": 5,
       "metadata": {},
       "outputs": [
         {
@@ -302,7 +302,7 @@
     },
     {
       "cell_type": "code",
-      "execution_count": 5,
+      "execution_count": 6,
       "metadata": {},
       "outputs": [],
       "source": [
@@ -336,7 +336,7 @@
     },
     {
       "cell_type": "code",
-      "execution_count": 6,
+      "execution_count": 7,
       "metadata": {},
       "outputs": [
         {
@@ -370,7 +370,7 @@
     },
     {
       "cell_type": "code",
-      "execution_count": 7,
+      "execution_count": 8,
       "metadata": {},
       "outputs": [],
       "source": [
@@ -407,7 +407,7 @@
     },
     {
       "cell_type": "code",
-      "execution_count": 8,
+      "execution_count": 9,
       "metadata": {},
       "outputs": [],
       "source": [
@@ -434,7 +434,7 @@
     },
     {
       "cell_type": "code",
-      "execution_count": 9,
+      "execution_count": 10,
       "metadata": {},
       "outputs": [
         {
@@ -443,7 +443,7 @@
               "False"
             ]
           },
-          "execution_count": 9,
+          "execution_count": 10,
           "metadata": {},
           "output_type": "execute_result"
         }
@@ -469,7 +469,7 @@
     },
     {
       "cell_type": "code",
-      "execution_count": 10,
+      "execution_count": 11,
       "metadata": {},
       "outputs": [
         {
@@ -504,14 +504,14 @@
     },
     {
       "cell_type": "code",
-      "execution_count": 11,
+      "execution_count": 12,
       "metadata": {},
       "outputs": [
         {
           "name": "stdout",
           "output_type": "stream",
           "text": [
-            "1\n"
+            "0\n"
           ]
         }
       ],
@@ -526,14 +526,14 @@
     },
     {
       "cell_type": "code",
-      "execution_count": 12,
+      "execution_count": 13,
       "metadata": {},
       "outputs": [
         {
           "name": "stdout",
           "output_type": "stream",
           "text": [
-            "[0, 2, 7]\n"
+            "[0, 1, 6]\n"
           ]
         }
       ],
@@ -575,7 +575,7 @@
     },
     {
       "cell_type": "code",
-      "execution_count": 13,
+      "execution_count": 14,
       "metadata": {},
       "outputs": [
         {
@@ -616,7 +616,8 @@
       "provenance": []
     },
     "kernelspec": {
-      "display_name": "Python 3",
+      "display_name": "Python 3.7.10 ('pymdp_env')",
+      "language": "python",
       "name": "python3"
     },
     "language_info": {
@@ -629,7 +630,12 @@
       "name": "python",
       "nbconvert_exporter": "python",
       "pygments_lexer": "ipython3",
-      "version": "3.8.8"
+      "version": "3.7.10"
+    },
+    "vscode": {
+      "interpreter": {
+        "hash": "43ee964e2ad3601b7244370fb08e7f23a81bd2f0e3c87ee41227da88c57ff102"
+      }
     }
   },
   "nbformat": 4,