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Merge pull request #389 from indigo-dc/dev-v1.3.8
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Dev v1.3.8
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@jorge-lip
jorge-lip authored Mar 24, 2023
2 parents 0ed8bc6 + d397b7b commit 831cf68
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2 changes: 1 addition & 1 deletion .sqa/config.yml
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Expand Up @@ -2,7 +2,7 @@ config:
credentials: []
project_repos:
github.com/indigo-dc/udocker:
branch: devel3
branch: dev-v1.3.8
repo: https://github.com/indigo-dc/udocker
environment:
JPL_DOCKERFORCEBUILD: enabled
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196 changes: 70 additions & 126 deletions CHANGELOG.md
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@@ -1,5 +1,12 @@
# Changelog

## udocker (1.3.8)

* build udockertools 1.2.9 and set it as default
* add Fn support for Ubuntu:22
* remove files to be installed
* set Fn preference to use runc

## udocker (1.3.7)

* Remove deprecated unit tests. udocker is the same as version 1.3.6
Expand All @@ -12,8 +19,7 @@

## udocker (1.3.5)

* fix python backwards compatibility issues
* closes: #374
* fix python backwards compatibility issues - closes: #374
* fix incorrectly reported errors by image verification
* fix image search returning empty results
* fix issue with logical links in the udocker executable path
Expand All @@ -24,8 +30,7 @@
* prevent closing of file descriptors upon engine invocation
improves PMI process management interface interoperability
* fix issues in import and export while using pipes.
* fix image name parsing where "library" component is missing
* closes: #359
* fix image name parsing where "library" component is missing - closes: #359

## udocker (1.3.4)

Expand Down Expand Up @@ -75,18 +80,14 @@
* Cmd and entrypoint metadata and arguments processing changed to mimic docker
* Improve removal of files and links in install and filebind restore
* Add follow location option to GetURL()
* Implement use of `--entrypoint=<cmd>` to force execution of command
* closes: #306
* Implement use of `--entrypoint=""` to bypass entrypoint in metadata
* closes: #306
* Implement use of `--entrypoint=<cmd>` to force execution of command - closes: #306
* Implement use of `--entrypoint=""` to bypass entrypoint in metadata - closes: #306

## udocker (1.2.9)

* method Unshare.unshare os.strerror() takes one argument,
* closes: #254
* method Unshare.unshare os.strerror() takes one argument - closes: #254
* Add unit test for #254
* Method chown udocker.utils.fileutil FileUtil
* closes: #276
* Method chown udocker.utils.fileutil FileUtil - closes: #276
* Several fixes of unit tests and pylint
* Fix confusion between exit code 0 and inferred False
* Dereference on `safe_prefixes`
Expand All @@ -108,16 +109,11 @@
* Fix handling of dockerhub repository names in /v2
* Improve documentation and algn with 1.1.8b2
* Add credits
* Fix delete of paths with symlinks
* closes: #267, #265
* Fix issues with login credentials
* closes: #310
* Fix pull images from docker hub in Termux
* closes: #307
* Fix issues on running udocker in googlecolab
* closes: #286
* Fix execution with Pn modes in alternate /tmp
* closes: #284
* Fix delete of paths with symlinks - closes: #267, #265
* Fix issues with login credentials - closes: #310
* Fix pull images from docker hub in Termux - closes: #307
* Fix issues on running udocker in googlecolab - closes: #286
* Fix execution with Pn modes in alternate /tmp - closes: #284
* Add conditional delay-directory-restore to untar layers
* Add exclude of whiteouts on layer untar
* Add --nobanner to udocker run
Expand All @@ -132,19 +128,14 @@

## udocker (1.1.7)

* Fix P1 when Linux 4.8.0 SECCOMP is backported, affects newer CentOS 7
* closes: #282
* Check for file ownership on remove wrongly follows symlinks
* closes: #266, #267
* udocker unexpectedly uses P1 exec mode instead of P2
* closes: #274
* Allow passing of `PROOT_TMP_DIR` environment variable
* closes: #284
* Fix P1 when Linux 4.8.0 SECCOMP is backported, affects newer CentOS 7 - closes: #282
* Check for file ownership on remove wrongly follows symlinks - closes: #266, #267
* udocker unexpectedly uses P1 exec mode instead of P2 - closes: #274
* Allow passing of `PROOT_TMP_DIR` environment variable - closes: #284

## udocker (1.1.6)

* Complete fix for of ELF paths in modes Fn for $ORIGIN:$ORIGIN
* closes: #255
* Complete fix for of ELF paths in modes Fn for $ORIGIN:$ORIGIN - closes: #255

## udocker (1.1.5)

Expand Down Expand Up @@ -198,97 +189,66 @@
* Improved fix of SECCOMP accelerated mode for P1 mode
* Added loading and handling of container images in OCI format
* Fixes for udocker in ARM aarch64
* Fix processing of --dri in Sn mode
* closes: #241
* Improve handling of container and host authentication
* partially addresses: #239
* Fixes to address authentication and redirects in pull
* closes: #225, #230
* Added minimal support to load OCI images
* closes: #111
* Added Pn support for newer distributions
* closes: #192
* Improve the installation of udockertools
* closes: #220, #228
* Read environment variables from file with --env-file=
* closes: #212
* Prepare for pypy
* closes: #211
* Fixes for verification of container images
* closes: #209
* Fix command line processing for "-" in argument
* closes: #202
* Fix file protections on extraction making files u+r
* closes: #202, #206
* Fix comparison of kernel versions having non-integers
* closes: #183
* Support for both manifest V2 schema 1 and schema 2
* closes: #218, #225
* Further improved pathname translation in Fn modes
* closes: #160
* Implement save images in docker format
* closes: #74
* useradd and groupadd not working in containers
* closes: #141
* fix return code when exporting to stdin
* closes: #202
* Fix processing of --dri in Sn mode - closes: #241
* Improve handling of container and host authentication - partially addresses: #239
* Fixes to address authentication and redirects in pull - closes: #225, #230
* Added minimal support to load OCI images - closes: #111
* Added Pn support for newer distributions - closes: #192
* Improve the installation of udockertools - closes: #220, #228
* Read environment variables from file with --env-file= - closes: #212
* Prepare for pypy - closes: #211
* Fixes for verification of container images - closes: #209
* Fix command line processing for "-" in argument - closes: #202
* Fix file protections on extraction making files u+r - closes: #202, #206
* Fix comparison of kernel versions having non-integers - closes: #183
* Support for both manifest V2 schema 1 and schema 2 - closes: #218, #225
* Further improved pathname translation in Fn modes - closes: #160
* Implement save images in docker format - closes: #74
* useradd and groupadd not working in containers - closes: #141
* fix return code when exporting to stdin - closes: #202

## udocker (1.1.3)

* Support for nvidia drivers on ubuntu
* closes: #162
* Installation improvements
* closes: #166
* Fix issue on Fn mode symlink convertion
* partially addresses: #160
* Support for nvidia drivers on ubuntu - closes: #162
* Installation improvements - closes: #166
* Fix issue on Fn mode symlink conversion - partially addresses: #160

## udocker (1.1.2)

* Improve parsing of quotes in the command line
* closes: #98
* Fix version command to exit with 0
* closes: #107
* Improve parsing of quotes in the command line - closes: #98
* Fix version command to exit with 0 - closes: #107
* Add kill-on-exit to proot on Pn modes
* Improve download of udocker utils
* Handle authentication headers when pulling
* closes: #110
* Handle authentication headers when pulling - closes: #110
* Handle of redirects when pulling
* Fix registries table
* Support search quay.io
* Fix auth header when no standard Docker registry is used
* Add registry detection on image name
* Add --version option
* Force python2 as interpreter
* closes: #131
* Force python2 as interpreter - closes: #131
* Fix handling of volumes in metadata
* Handle empty metadata
* Fix http proxy functionality
* closes: #115
* Ignore --no-trunc and --all in the images command
* closes: #108
* Fix http proxy functionality - closes: #115
* Ignore --no-trunc and --all in the images command - closes: #108
* Implement verification of layers in manifest
* Add --nvidia to support GPUs and related drivers
* Send download messages to stderr
* Enable override of curl executable
* Fix building on CentOS 6
* closes: #157
* Mitigation for upstream limitation in runC without tty
* closes: #132
* Fix detection of executable with symlinks in container
* closes: #118
* Fix building on CentOS 6 - closes: #157
* Mitigation for upstream limitation in runC without tty - closes: #132
* Fix detection of executable with symlinks in container - closes: #118
* Updated runC to v1.0.0-rc5
* Experimental support for Alpine in Fn modes
* Improve pathname translation in Fn modes for mounted dirs
* partially addresses: #160
* Improve pathname translation in Fn modes for mounted dirs - partially addresses: #160

## udocker (1.1.1)

* New execution engine using singularity
* Updated documentation with OpenMPI information and examples
* Additional unit tests
* Redirect messages to stderr
* Improved parsing of quotes in the command line
* closes: #87
* Improved parsing of quotes in the command line - closes: #87
* Allow override of the HOME environment variable
* Allow override of libfakechroot.so at the container level
* Automatic selection of libfakechroot.so from container info
Expand All @@ -300,10 +260,8 @@
* Load, import and export to/from stdin/stdout
* Clone existing containers
* Support for TCP/IP port remap in execution modes Pn
* Fix run with basenames failing
* closes: #89
* Allow run as root flag
* closes: #91
* Fix run with basenames failing - closes: #89
* Allow run as root flag - closes: #91

## udocker (1.1.0)

Expand All @@ -314,10 +272,8 @@
* Improve proot tmp files cleanup on non ext filesystems
* Improve search returning empty on Docker repositories
* Improve runC execution portability
* Add environment variable `UDOCKER_KEYSTORE`
* closes: #75
* Prevent creation of .udocker when `UDOCKER_KEYSTORE` is used
* closes: #75
* Add environment variable `UDOCKER_KEYSTORE` - closes: #75
* Prevent creation of .udocker when `UDOCKER_KEYSTORE` is used - closes: #75

## udocker (1.0.4)

Expand All @@ -329,27 +285,19 @@
* Improve the command line parsing
* Improve temporary file handling and removal
* Support for additional execution engines to be provided in the future
* Improved parsing of entrypoint and cmd metadata
* closes: #53
* Increase name alias length
* closes: #52
* Add support for change dir into volume directories
* closes: #51
* Fix deletion of files upon container import
* closes: #50
* Fix exporting of host environment variables to the containers
* closes: #48
* Change misleading behavior of import tarball from move to copy
* closes: #44
* Fix validation of volumes specification
* closes: #43
* Improved parsing of entrypoint and cmd metadata - closes: #53
* Increase name alias length - closes: #52
* Add support for change dir into volume directories - closes: #51
* Fix deletion of files upon container import - closes: #50
* Fix exporting of host environment variables to the containers - closes: #48
* Change misleading behavior of import tarball from move to copy - closes: #44
* Fix validation of volumes specification - closes: #43

## udocker (1.0.2)

* Improve download on repositories that fail authentication on /v2
* Improve run verification of binaries with recursive symbolic links
* Improve accelerated seccomp on kernels >= 4.8.0
* closes: #40
* Improve accelerated seccomp on kernels >= 4.8.0 - closes: #40

## udocker (1.0.1)

Expand All @@ -364,14 +312,10 @@
* Insecure flag fixed
* Address seccomp change introduced on kernels >= 4.8.0
* Utilities for packaging
* Improved verbose levels, messaging and output
* closes: #24, #23
* Fully implement support for registry selection --registry parameter
* closes: #29
* Provide support for private repositories e.g. gitlab registries
* closes: #30
* Provide --insecure command line parameter for SSL requests
* closes: #31
* Improved verbose levels, messaging and output - closes: #24, #23
* Fully implement support for registry selection --registry parameter - closes: #29
* Provide support for private repositories e.g. gitlab registries - closes: #30
* Provide --insecure command line parameter for SSL requests - closes: #31

## udocker (1.0.0)

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1 change: 0 additions & 1 deletion CODE_OF_CONDUCT.md
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Expand Up @@ -130,4 +130,3 @@ For answers to common questions about this code of conduct, see the FAQ at
[Mozilla CoC]: https://github.com/mozilla/diversity
[FAQ]: https://www.contributor-covenant.org/faq
[translations]: https://www.contributor-covenant.org/translations

6 changes: 3 additions & 3 deletions README.md
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Expand Up @@ -29,9 +29,9 @@ containers with minimal functionality.
The full documentation is available at:

* [udocker documentation](https://indigo-dc.github.io/udocker/)
* [Installation manual](https://indigo-dc.github.io/udocker/installation_manual.html)
* [User manual](https://indigo-dc.github.io/udocker/user_manual.html)
* [Reference card](https://indigo-dc.github.io/udocker/reference_card.html)
* [Installation manual](https://indigo-dc.github.io/udocker/installation_manual.html)
* [User manual](https://indigo-dc.github.io/udocker/user_manual.html)
* [Reference card](https://indigo-dc.github.io/udocker/reference_card.html)

## How does it work

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2 changes: 1 addition & 1 deletion codemeta.json
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Expand Up @@ -6,7 +6,7 @@
"@type": "SoftwareSourceCode",
"identifier": "udocker",
"name": "udocker",
"version": "1.3.7",
"version": "1.3.8",
"description": "A basic user tool to execute simple docker containers in batch or interactive systems without root privileges",
"license": "Apache Software License 2.0, OSI Approved :: Apache Software License",
"author": [
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18 changes: 9 additions & 9 deletions docs/installation_manual.md
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Expand Up @@ -32,18 +32,18 @@ udocker requires:
Download a release tarball from <https://github.com/indigo-dc/udocker/releases>:

```bash
wget https://github.com/indigo-dc/udocker/releases/download/1.3.7/udocker-1.3.7.tar.gz
tar zxvf udocker-1.3.7.tar.gz
export PATH=`pwd`/udocker-1.3.7/udocker:$PATH
wget https://github.com/indigo-dc/udocker/releases/download/1.3.8/udocker-1.3.8.tar.gz
tar zxvf udocker-1.3.8.tar.gz
export PATH=`pwd`/udocker-1.3.8/udocker:$PATH
```

Alternatively use `curl` instead of `wget` as follows:

```bash
curl -L https://github.com/indigo-dc/udocker/releases/download/1.3.7/udocker-1.3.7.tar.gz \
> udocker-1.3.7.tar.gz
tar zxvf udocker-1.3.7.tar.gz
export PATH=`pwd`/udocker-1.3.7/udocker:$PATH
curl -L https://github.com/indigo-dc/udocker/releases/download/1.3.8/udocker-1.3.8.tar.gz \
> udocker-1.3.8.tar.gz
tar zxvf udocker-1.3.8.tar.gz
export PATH=`pwd`/udocker-1.3.8/udocker:$PATH
```

udocker executes containers using external tools and libraries that
Expand Down Expand Up @@ -345,8 +345,8 @@ The udocker tool should be installed as shown in section 2.1:

```bash
cd /sw
wget https://github.com/indigo-dc/udocker/releases/download/1.3.7/udocker-1.3.7.tar.gz
tar zxvf udocker-1.3.7.tar.gz
wget https://github.com/indigo-dc/udocker/releases/download/1.3.8/udocker-1.3.8.tar.gz
tar zxvf udocker-1.3.8.tar.gz
```

Directing users to the central udocker installation can be done using the
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