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Implementations of different methods for extracting DNA features

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Name		Name	Last commit message	Last commit date
Latest commit History 37 Commits
ANF.py		ANF.py
CKSNAP.py		CKSNAP.py
DNC.py		DNC.py
EIIP.py		EIIP.py
ENAC.py		ENAC.py
NAC.py		NAC.py
NCP.py		NCP.py
PseEIIP.py		PseEIIP.py
RCKmer.py		RCKmer.py
README.md		README.md
TNC.py		TNC.py
binary.py		binary.py
feature.py		feature.py
feature_fasta.fasta		feature_fasta.fasta
kmer.py		kmer.py

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dna_features

格式和运行

这是一个常用的DNA特征提取方法的实现，通过下面命令行的运行可以得到多个特征文件。
输入文件格式：标准的fasta文件格式
运行

python feature.py -fasta fastafile

输出：所有的特征以文件形式保存，文件名字是特征名字
其实，DNC就是2-mer，TNC就是3-mer。而kmer中的k我默认设置的是4，也就是4-mer。

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Implementations of different methods for extracting DNA features

bioinformatics genomics sequencing

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