Skip to content

Issues: hdmf-dev/hdmf-zarr

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort

Issues list

[Bug]: validation error on NWB Zarr file category: bug errors in the code or code behavior priority: medium non-critical problem and/or affecting only a small set of users
#221 opened Sep 25, 2024 by CodyCBakerPhD
3 tasks done
[Bug]: datetimes in pynwb.validate on NWB Zarr
#220 opened Sep 25, 2024 by CodyCBakerPhD
3 tasks done
[Bug]: numpy 2.0 causes pynwb ZarrIO tutorial to fail category: bug errors in the code or code behavior priority: high impacts proper operation or use of feature important to most users
#213 opened Aug 20, 2024 by pauladkisson
3 tasks done
[Bug]: NWB Zarr to HDMF export fails category: bug errors in the code or code behavior priority: medium non-critical problem and/or affecting only a small set of users
#211 opened Aug 8, 2024 by rcpeene
3 tasks done
[Bug]: Reading and exporting Zarr NWB fails to copy over table information category: bug errors in the code or code behavior priority: medium non-critical problem and/or affecting only a small set of users
#208 opened Jul 29, 2024 by rcpeene
3 tasks done
[Bug]: [0.7.0, 0.8.0] Fails to open file with consolidated metadata from S3 category: bug errors in the code or code behavior priority: medium non-critical problem and/or affecting only a small set of users
#205 opened Jul 15, 2024 by bjhardcastle
3 tasks done
[Feature]: Support zarr-python v3 category: enhancement improvements of code or code behavior
#202 opened Jun 18, 2024 by rly
3 tasks done
Future
[Bug]: Writing NWB with experimenter (or any ArrayLike[str]) fails category: bug errors in the code or code behavior priority: low alternative solution already working and/or relevant to only specific user(s)
#197 opened May 23, 2024 by bjhardcastle
3 tasks done
[Feature]: Explore use of Zarrita category: proposal proposed enhancements or new features priority: low alternative solution already working and/or relevant to only specific user(s)
#196 opened May 20, 2024 by oruebel
3 tasks done
Future
[Feature]: Use copy_store for copying existing zarr data category: proposal proposed enhancements or new features priority: medium non-critical problem and/or affecting only a small set of users topic: ZarrIO Feature request related to the ZarrIO backend
#191 opened May 7, 2024 by bjhardcastle
3 tasks done
Future
Zarr datasets info lack compression data category: bug errors in the code or code behavior priority: low alternative solution already working and/or relevant to only specific user(s)
#186 opened Apr 26, 2024 by h-mayorquin
[Feature]: Support pathlib.Path in ZarrIO category: bug errors in the code or code behavior priority: low alternative solution already working and/or relevant to only specific user(s)
#181 opened Apr 2, 2024 by CodyCBakerPhD
3 tasks done
1.0.0
[Bug]: export fails to correctly save units after adding columns category: bug errors in the code or code behavior priority: medium non-critical problem and/or affecting only a small set of users topic: storage issues related to storage schema and formats
#179 opened Mar 27, 2024 by alejoe91
3 tasks done
0.7.0
[Feature]: Write zarr without using pickle category: enhancement improvements of code or code behavior priority: low alternative solution already working and/or relevant to only specific user(s)
#171 opened Feb 29, 2024 by magland
3 tasks done
Next Major Release: 1.0.0
[Feature]: Refactor tox.ini to match HDMF category: enhancement improvements of code or code behavior priority: low alternative solution already working and/or relevant to only specific user(s)
#169 opened Feb 22, 2024 by mavaylon1
3 tasks done
[Feature]: Test without consolidate metadata category: enhancement improvements of code or code behavior priority: low alternative solution already working and/or relevant to only specific user(s)
#148 opened Dec 12, 2023 by mavaylon1
3 tasks done
[Bug]: Extension namespaces not exported from HDF5 NWB category: bug errors in the code or code behavior priority: medium non-critical problem and/or affecting only a small set of users
#145 opened Dec 8, 2023 by sneakers-the-rat
3 tasks done
1.0.0
[Bug]: reading unit table arrays via string keys much slower than reading as properties category: enhancement improvements of code or code behavior priority: low alternative solution already working and/or relevant to only specific user(s)
#141 opened Nov 16, 2023 by dyf
3 tasks done
1.0.0
[Documentation]: Add tutorial for S3 streaming priority: medium non-critical problem and/or affecting only a small set of users topic: docs Issues related to documentation
#140 opened Nov 14, 2023 by oruebel
3 tasks done
0.7.0
[Feature]: Expose mode to NWBZarrIO category: enhancement improvements of code or code behavior priority: medium non-critical problem and/or affecting only a small set of users
#137 opened Nov 7, 2023 by CodyCBakerPhD
3 tasks done
[Feature]: Create an example NWB Zarr dataset category: enhancement improvements of code or code behavior priority: low alternative solution already working and/or relevant to only specific user(s)
#135 opened Oct 28, 2023 by rly
3 tasks done
Future
[Feature]: Export dtypes category: bug errors in the code or code behavior
#124 opened Sep 29, 2023 by mavaylon1
3 tasks done
0.7.0
[Feature]: Prevent Write on Containers with custom names category: bug errors in the code or code behavior priority: medium non-critical problem and/or affecting only a small set of users
#122 opened Sep 28, 2023 by mavaylon1
3 tasks done
0.7.0
[Bug]: Cannot overwrite existing HDF5 .nwb file with mode="w" category: bug errors in the code or code behavior priority: medium non-critical problem and/or affecting only a small set of users topic: storage issues related to storage schema and formats
#117 opened Aug 28, 2023 by CodyCBakerPhD
3 tasks done
1.0.0
ProTip! Type g p on any issue or pull request to go back to the pull request listing page.