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update ChangeLog for cam6_3_162
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cacraigucar committed Jun 7, 2024
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===============================================================

Tag name: cam6_3_162
Originator(s): cacraig, jedwards, nusbaume
Date: June 7, 2024
One-line Summary: Remove manage externals
Github PR URL: https://github.com/ESCOMP/CAM/pull/1052

Purpose of changes (include the issue number and title text for each relevant GitHub issue):
- Removes manage_externals/checkout_externals and replaces with git-fleximod (no GitHub issue)

Describe any changes made to build system: N/A

Describe any changes made to the namelist: N/A

List any changes to the defaults for the boundary datasets: N/A

Describe any substantial timing or memory changes: N/A

Code reviewed by: cacraigucar

List all files eliminated:
D Externals.cfg
D Externals_CAM.cfg
D manage_externals
- Removed manage_externals functionality

List all files added and what they do:
A .gitmodules
A .lib/git-fleximod
- Add git-fleximod functionality

A bin/git-fleximod
- The actual git-fleximod executable

A ccs_config
A chem_proc
A cime
A components/cdeps
A components/cice
A components/cism
A components/clm
A components/cmeps
A components/mizuRoute
A components/mosart
A components/rtm
A libraries/FMS
A libraries/mct
A libraries/parallelio
A share
A src/atmos_phys
A src/chemistry/geoschem/geoschem_src
A src/dynamics/fv3
A src/dynamics/mpas/dycore
A src/hemco
A src/physics/ali_arms
A src/physics/carma/base
A src/physics/clubb
A src/physics/cosp2/src
A src/physics/pumas
A src/physics/pumas-frozen
A src/physics/rrtmgp/data
A src/physics/rrtmgp/ext
- Added external directories as required by git-submodule, which git-fleximod is built upon

List all existing files that have been modified, and describe the changes:

M .gitignore
- Removed unneeded gitignore lines

M README.md
- Updated README to reflect new git-fleximod

M manage_externals/checkout_externals
- Script which tells folks where to find git-fleximod (when they were used to running manage_externals)

M test/system/TGIT.sh
- modified test to include a check for require .gitmodules file

If there were any failures reported from running test_driver.sh on any test
platform, and checkin with these failures has been OK'd by the gatekeeper,
then copy the lines from the td.*.status files for the failed tests to the
appropriate machine below. All failed tests must be justified.

Most tests had the following namelist failures:
-----
Comparison failed between '/glade/derecho/scratch/cacraig/aux_cam_20240606135848/SMS_Ln9.f19_f19_mg17.FHIST.derecho_intel.cam-outfrq9s_nochem.GC.aux_cam_20240606135848/CaseDocs/nuopc.runconfig' with '/glade/campaign/cesm/community/amwg/cam_baselines/cam6_3_161/SMS_Ln9.f19_f19_mg17.FHIST.derecho_intel.cam-outfrq9s_nochem/CaseDocs/nuopc.runconfig'
DRIVER_attributes->PELAYOUT_attributes->ALLCOMP_attributes:
ocn2glc_levels as key not in /glade/derecho/scratch/cacraig/aux_cam_20240606135848/SMS_Ln9.f19_f19_mg17.FHIST.derecho_intel.cam-outfrq9s_nochem.GC.aux_cam_20240606135848/CaseDocs/nuopc.runconfig
-----

derecho/intel/aux_cam:

SMS_Lh12.f09_f09_mg17.FCSD_HCO.derecho_intel.cam-outfrq3h (Overall: DIFF) details:
ERP_Ln9.f09_f09_mg17.FCSD_HCO.derecho_intel.cam-outfrq9s (Overall: FAIL) details:
- pre-existing failure due to HEMCO not having reproducible results

ERP_Lh12.f19_f19_mg17.FW4madSD.derecho_intel.cam-outfrq3h (Overall: DIFF) details:
FAIL ERP_Lh12.f19_f19_mg17.FW4madSD.derecho_intel.cam-outfrq3h BASELINE /glade/campaign/cesm/community/amwg/cam_baselines/cam6_3_161: ERROR BFAIL some baseline files were missing
- This test did not run in previous tag due to CTSM tag failure. Is now running, but no baseline to compare against

ERP_Ln9.ne30_ne30_mg17.FCnudged.derecho_intel.cam-outfrq9s (Overall: FAIL) details:
FAIL ERP_Ln9.ne30_ne30_mg17.FCnudged.derecho_intel.cam-outfrq9s SHAREDLIB_BUILD failed to initialize
SMS_D_Ln9.ne16_ne16_mg17.FX2000.derecho_intel.cam-outfrq9s (Overall: PEND) details:
PEND SMS_D_Ln9.ne16_ne16_mg17.FX2000.derecho_intel.cam-outfrq9s SHAREDLIB_BUILD
SMS_D_Ln9_P1280x1.ne0ARCTICne30x4_ne0ARCTICne30x4_mt12.FHIST.derecho_intel.cam-outfrq9s (Overall: PEND) details:
PEND SMS_D_Ln9_P1280x1.ne0ARCTICne30x4_ne0ARCTICne30x4_mt12.FHIST.derecho_intel.cam-outfrq9s SHAREDLIB_BUILD
SMS_D_Ln9_P1280x1.ne0CONUSne30x8_ne0CONUSne30x8_mt12.FCHIST.derecho_intel.cam-outfrq9s (Overall: PEND) details:
PEND SMS_D_Ln9_P1280x1.ne0CONUSne30x8_ne0CONUSne30x8_mt12.FCHIST.derecho_intel.cam-outfrq9s SHAREDLIB_BUILD
- These transient grids are no longer supported by CTSM - will update tests in future PR

SMS_D_Ln9.T42_T42.FSCAM.derecho_intel.cam-outfrq9s (Overall: FAIL) details:
FAIL SMS_D_Ln9.T42_T42.FSCAM.derecho_intel.cam-outfrq9s RUN time=43
- Bug in med.F90 - Will go away when CICE external is updated post git-fleximod

SMS_Lm13.f10_f10_mg37.F2000climo.derecho_intel.cam-outfrq1m (Overall: DIFF) details:
FAIL SMS_Lm13.f10_f10_mg37.F2000climo.derecho_intel.cam-outfrq1m BASELINE
/glade/campaign/cesm/community/amwg/cam_baselines/cam6_3_161: FIELDLIST field lists differ (otherwise bit-for-bit)
- cice history file has attributes that changed with this run

izumi/nag/aux_cam:
DAE.f45_f45_mg37.FHS94.izumi_nag.cam-dae (Overall: FAIL) details:
- pre-existing failure

izumi/gnu/aux_cam:
SMS_P48x1_D_Ln9.f19_f19_mg17.FW4madSD.izumi_gnu.cam-outfrq9s (Overall: DIFF) details:
FAIL SMS_P48x1_D_Ln9.f19_f19_mg17.FW4madSD.izumi_gnu.cam-outfrq9s BASELINE /fs/cgd/csm/models/atm/cam/pretag_bl/cam6_3_161_gnu: ERROR BFAIL some baseline files were missing
- This test did not run in previous tag due to CTSM tag failure. Is now running, but no baseline to compare against

===============================================================
===============================================================

Tag name: cam6_3_161
Originator(s): cacraig
Date: May 16, 2024
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