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  1. hybracter hybracter Public

    Automated long-read first bacterial genome assembly tool implemented in Snakemake using Snaketool.

    Python 84 7

  2. pharokka pharokka Public

    fast phage annotation program

    Python 139 14

  3. phold phold Public

    Phage Annotation using Protein Structures

    Python 64 3

  4. dnaapler dnaapler Public

    Reorients assembled microbial sequences

    Python 89 3

  5. plassembler plassembler Public

    Program to quickly and accurately assemble plasmids in hybrid and long-only sequenced bacterial isolates

    Python 49 3

  6. pypolca pypolca Public

    Standalone Python re-implementation of the POLCA polisher from MaSuRCA

    Python 23 1