microglia

Code used for the manuscript: Microglia accumulation is essential for tissue contraction in wound closure after brain injury in zebrafish larvae

Name		Name	Last commit message	Last commit date
Latest commit History 2 Commits
170521_trajectory_randomizer_Neurons.py		170521_trajectory_randomizer_Neurons.py
3D_ROI_drawing.ijm		3D_ROI_drawing.ijm
Blind_Analysis.ijm		Blind_Analysis.ijm
Img2cells_2D.py		Img2cells_2D.py
Intersection_analysis_2D.py		Intersection_analysis_2D.py
Makefile		Makefile
OT_2D.cpp		OT_2D.cpp
OT_2D.h		OT_2D.h
PhysiCell_settings.xml		PhysiCell_settings.xml
README.md		README.md
accumulation_analysis_2D_140520.py		accumulation_analysis_2D_140520.py
distance_pt_curve.py		distance_pt_curve.py
intersection_points_tracks.py		intersection_points_tracks.py
main-OT_2D.cpp		main-OT_2D.cpp
track_anisotropy_analysis_2D_270420.py		track_anisotropy_analysis_2D_270420.py
track_anisotropy_analysis_2D__irf8_200520.py		track_anisotropy_analysis_2D__irf8_200520.py
track_convergence_analysis_2D_200420.py		track_convergence_analysis_2D_200420.py
track_convergence_analysis_2D_irf8_150520.py		track_convergence_analysis_2D_irf8_150520.py
track_similarity_analysis_MTrack_120521.py		track_similarity_analysis_MTrack_120521.py
track_similarity_analysis_MTrack__shuffled_140521.py		track_similarity_analysis_MTrack__shuffled_140521.py
track_vector_analysis_3D.py		track_vector_analysis_3D.py

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