I2b2 Export

Atlanta Clinical and Translational Science Institute (ACTSI), Emory University, Atlanta, GA

What does it do?

It is an i2b2 plugin and Java web service for exporting patient data to CSV files. This project includes three modules:

• i2b2-export-plugin: the web client plugin that the user interacts with
• i2b2-export-service: the Java service that manages users' export configurations and communicates with i2b2 to retrieve data
• i2b2-export-package: packages up the plugin and service into a single archive for distribution

Version 1.1 development series

Latest release:

The 1.1 development series will migrate this package to the Eureka! Clinical build system.

Version history

Version 1.0

Initial release.

Build requirements

• Oracle Java JDK 8
• Maven 3.2.5 or greater

Runtime requirements

• Oracle Java JRE 8
• Tomcat 7 (for i2b2-export-service)
• i2b2 version 1.7

Building it

The project uses the maven build tool. Typically, you build it by invoking mvn clean install at the command line. For simple file changes, not additions or deletions, you can usually use mvn install. See https://github.com/eurekaclinical/dev-wiki/wiki/Building-Eureka!-Clinical-projects for more details.

Installation

See the READMEs for the i2b2-export-plugin and i2b2-export-service modules for installation instructions.

Getting help

Feel free to contact us at [email protected].