Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

add a positive test for _pubchem_smiles_to_inchikey #1451

Conversation

olamidepeterojo
Copy link
Contributor

Thank you for taking your time to contribute to Ersilia, just a few checks before we proceed

  • Have you followed the guidelines in our Contribution Guide
  • Have you written new tests for your core changes, as applicable?
  • Have you successfully ran tests with your changes locally?

Description

This commit will add a positive test for _pubchem_smiles_to_inchikey

Changes to be made

Added a new test function for _pubchem_smiles_to_inchikey positive test in test/test_compound_identifier.py

Status

  • Written test and validated logically using pytest

To do

If this is a work in progress, Replace this line with your next steps

Is this pull request related to any open issue? If yes, replace issueID below with the issue ID

Related to #1319

Abellegese and others added 3 commits December 16, 2024 19:13
…e and few update on the utils module (ersilia-os#1448)

* Merge sample command with the example command (ersilia-os#1422)

* Merge sample command with the example command

* Fix example command usage

* Generalize Standard Run  (ersilia-os#1411)

* Modify header calculation to choose from predefined example output file or standard example output file

* Remove the readiness function from SCRA because it is redundant, since those checks are also performed by the amenable function

* Remove unused method

* Make csv serialization work for any kind of model api response

* Remove the standard flag from the CLI since it is now the default run

* Update tests

* Unnecessary files removed

* Unnecessary files removed

* Unnecessary files removed

* Unnecessary files removed

* Unnecessary files removed

* Some import cleanup

* Few code fixes

* Few code fixes

* Add detailed docstrings and usage examples to Ersilia'a utils module

* Add detailed docstrings and usage examples to Ersilia'a utils module

* Merge sample command with the example command (ersilia-os#1422)

* Merge sample command with the example command

* Fix example command usage

* Generalize Standard Run  (ersilia-os#1411)

* Modify header calculation to choose from predefined example output file or standard example output file

* Remove the readiness function from SCRA because it is redundant, since those checks are also performed by the amenable function

* Remove unused method

* Make csv serialization work for any kind of model api response

* Remove the standard flag from the CLI since it is now the default run

* Update tests

* Unnecessary files removed

* Unnecessary files removed

* Unnecessary files removed

* Unnecessary files removed

* Unnecessary files removed

* Some import cleanup

---------

Co-authored-by: Dhanshree Arora <[email protected]>
@DhanshreeA DhanshreeA self-requested a review December 17, 2024 06:05
@DhanshreeA DhanshreeA force-pushed the master branch 5 times, most recently from 143ebdf to e896fd1 Compare December 17, 2024 21:51
@DhanshreeA DhanshreeA self-requested a review December 19, 2024 17:50
@DhanshreeA DhanshreeA merged commit 0685109 into ersilia-os:master Dec 19, 2024
24 checks passed
@olamidepeterojo olamidepeterojo deleted the _pubchem_smiles_to_inchikey_positive branch December 19, 2024 21:24
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

3 participants