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Large-scale graph transformer

GROVER is a self-supervised Graph Neural Network for molecular representation pretrained with 10 million unlabelled molecules from ChEMBL and ZINC15. The model provided has been pre-trained on 10 million molecules (GROVERlarge). GROVER has then been fine-tuned to predict several activities from the MoleculeNet benchmark, consistently outperforming other state-of-the-art methods for serveral benchmark datasets.

Identifiers

  • EOS model ID: eos7w6n
  • Slug: grover-embedding

Characteristics

  • Input: Compound
  • Input Shape: Single
  • Task: Representation
  • Output: Descriptor
  • Output Type: Float
  • Output Shape: List
  • Interpretation: Embedding representation of a molecule

References

Ersilia model URLs

Citation

If you use this model, please cite the original authors of the model and the Ersilia Model Hub.

License

This package is licensed under a GPL-3.0 license. The model contained within this package is licensed under a MIT license.

Notice: Ersilia grants access to these models 'as is' provided by the original authors, please refer to the original code repository and/or publication if you use the model in your research.

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The Ersilia Open Source Initiative is a Non Profit Organization (1192266) with the mission is to equip labs, universities and clinics in LMIC with AI/ML tools for infectious disease research.

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Grover embedding for molecular representation

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