update hamap and prosite properties to 2023_05

core/jms-implementation/src/main/resources/application-default.properties

@@ -134,10 +134,10 @@ hmmer3.hmmsearch.switches.funfam=-Z 65245 --cut_tc
 
 # HAMAP
 binary.hamap.pfsearch.wrapperpath=${bin.directory}/prosite/pfsearch_wrapper.py
-hamap.signature.library.release=2023_01
-hamap.profile.models.path=${data.directory}/hamap/2023_01/hamap.prf
-hamap.profile.models.dir=${data.directory}/hamap/2023_01/profiles
-hamap.hmm.path=${data.directory}/hamap/2023_01/hamap.hmm.lib
+hamap.signature.library.release=2023_05
+hamap.profile.models.path=${data.directory}/hamap/2023_05/hamap.prf
+hamap.profile.models.dir=${data.directory}/hamap/2023_05/profiles
+hamap.hmm.path=${data.directory}/hamap/2023_05/hamap.hmm.lib
 hmmer3.hmmsearch.cpu.switch.hmmfilter=--cpu 1
 hmmer3.hmmsearch.switches.hmmfilter=-E 100 --domE 100 --incE 100 --incdomE 100
 pfsearchv3.hamap.binary.switches=-f -o 7
@@ -213,17 +213,17 @@ fingerprintscan.binary.switches=-e 0.0001 -d 10 -E 257043 84355444 -fj -o 15
 
 # PROSITE
 # Note: Correct PROSITE binary distribution for your platform can be downloaded: ftp://ftp.expasy.org/databases/prosite/ps_scan/
-prosite.patterns.signature.library.release=2022_05
-prosite.profiles.signature.library.release=2022_05
+prosite.patterns.signature.library.release=2023_05
+prosite.profiles.signature.library.release=2023_05
 binary.prosite.psscan.pl.path=${bin.directory}/prosite/ps_scan.pl
 binary.prosite.pfscanv3.path=${bin.directory}/prosite/pfscanV3
 binary.prosite.pfsearchv3.path=${bin.directory}/prosite/pfsearchV3
 binary.prosite.runprosite.path=${bin.directory}/prosite/runprosite.py
-prosite.patterns.models.path=${data.directory}/prosite/2022_05/prosite_patterns.dat
-prosite.profiles.models.path=${data.directory}/prosite/2022_05/prosite_profiles.dat
-prosite.profiles.models.dir=${data.directory}/prosite/2022_05/prosite_profiles
-prosite.evaluator.models.path=${data.directory}/prosite/2022_05/evaluator.dat
-prosite.profiles.skip.flagged.profiles=${data.directory}/prosite/2022_05/skip_flagged_profiles.txt
+prosite.patterns.models.path=${data.directory}/prosite/2023_05/prosite_patterns.dat
+prosite.profiles.models.path=${data.directory}/prosite/2023_05/prosite_profiles.dat
+prosite.profiles.models.dir=${data.directory}/prosite/2023_05/prosite_profiles
+prosite.evaluator.models.path=${data.directory}/prosite/2023_05/evaluator.dat
+prosite.profiles.skip.flagged.profiles=${data.directory}/prosite/2023_05/skip_flagged_profiles.txt
 psscan.prosite.profiles.usepfsearch=true
 pfsearchv3.binary.switches.prosite.profiles=-f -o 7
 pfsearchv3.cpu.switch.prosite.profiles=-t 4

core/jms-implementation/support-mini-x86-32/installer.properties

@@ -32,8 +32,8 @@ gene3d.cath.family.names=data/gene3d/4.3.0/cath-family-names.txt
 gene3d.model2sf_map.path=data/gene3d/4.3.0/model_to_family_map.tsv
 
 # HAMAP
-hamap.signature.library.release=2023_01
-hamap.profile.models.path=data/hamap/2023_01/hamap.prf
+hamap.signature.library.release=2023_05
+hamap.profile.models.path=data/hamap/2023_05/hamap.prf
 
 # MobiDB
 mobidb.signature.library.release=2.0
@@ -63,10 +63,10 @@ prints.kdat.path=data/prints/42.0/prints.kdat
 prints.pval.path=data/prints/42.0/prints.pval
 
 # Prosite
-prosite.patterns.signature.library.release=2022_05
-prosite.patterns.models.path=data/prosite/2022_05/prosite_patterns.dat
-prosite.profiles.signature.library.release=2022_05
-prosite.profiles.models.path=data/prosite/2022_05/prosite_profiles.dat
+prosite.patterns.signature.library.release=2023_05
+prosite.patterns.models.path=data/prosite/2023_05/prosite_patterns.dat
+prosite.profiles.signature.library.release=2023_05
+prosite.profiles.models.path=data/prosite/2023_05/prosite_profiles.dat
 
 # SFLD
 sfld.signature.library.release=4

core/jms-implementation/support-mini-x86-32/interproscan.properties

@@ -22,7 +22,7 @@ binary.hmmer33.path=${bin.directory}/hmmer/hmmer3/3.3
 ####################################
 antifam.hmm.path=${data.directory}/antifam/7.0/AntiFam.hmm
 gene3d.hmm.path=${data.directory}/gene3d/4.3.0/gene3d_main.hmm
-hamap.hmm.path=${data.directory}/hamap/2023_01/hamap.hmm.lib
+hamap.hmm.path=${data.directory}/hamap/2023_05/hamap.hmm.lib
 ncbifam.hmm.path=${data.directory}/ncbifam/13.0/ncbifam.hmm
 panther.hmm.path=${data.directory}/panther/18.0/famhmm/binHmm
 pfam-a.hmm.path=${data.directory}/pfam/36.0/pfam_a.hmm