Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Natalie .yml test pull #926

Closed

Commits on Jun 29, 2023

  1. Configuration menu
    Copy the full SHA
    85435f4 View commit details
    Browse the repository at this point in the history
  2. Configuration menu
    Copy the full SHA
    da4d4a2 View commit details
    Browse the repository at this point in the history

Commits on Jun 30, 2023

  1. another test

    testing to see if image_build_push runs
    nataliejschultz committed Jun 30, 2023
    Configuration menu
    Copy the full SHA
    e8e2509 View commit details
    Browse the repository at this point in the history
  2. Docker image build modified

    Testing setup_config.sh echoes and attempting to produce error out of test-with-docker.yml
    nataliejschultz committed Jun 30, 2023
    Configuration menu
    Copy the full SHA
    8da3e13 View commit details
    Browse the repository at this point in the history
  3. Test with docker retry

    Commented out the docker -compose command because it was taking much longer than expected.
    nataliejschultz committed Jun 30, 2023
    Configuration menu
    Copy the full SHA
    f1ce663 View commit details
    Browse the repository at this point in the history
  4. Finding error location

    Adding a few more echoes to find exact location of error + commenting out unnecessary parts of docker build test
    nataliejschultz committed Jun 30, 2023
    Configuration menu
    Copy the full SHA
    c38f6d0 View commit details
    Browse the repository at this point in the history
  5. Fix dockerfile echo

    Re-doing echo command  to find error.
    nataliejschultz committed Jun 30, 2023
    Configuration menu
    Copy the full SHA
    005a894 View commit details
    Browse the repository at this point in the history
  6. Finding error

    another push to try and find error
    nataliejschultz committed Jun 30, 2023
    Configuration menu
    Copy the full SHA
    2c30a34 View commit details
    Browse the repository at this point in the history
  7. Push test

    Stopping image build test from running with every push. Trying set -e command to see if it makes a difference.
    nataliejschultz committed Jun 30, 2023
    Configuration menu
    Copy the full SHA
    683760f View commit details
    Browse the repository at this point in the history
  8. set -e

    trying again
    nataliejschultz committed Jun 30, 2023
    Configuration menu
    Copy the full SHA
    44c0cc6 View commit details
    Browse the repository at this point in the history

Commits on Jul 5, 2023

  1. set -eE + trap command

    Attempt at getting an error message and stopping build.
    nataliejschultz committed Jul 5, 2023
    Configuration menu
    Copy the full SHA
    7c6ff1b View commit details
    Browse the repository at this point in the history
  2. -vv Verbose output

    Trying to add verbose output to see logs
    nataliejschultz committed Jul 5, 2023
    Configuration menu
    Copy the full SHA
    93bdb98 View commit details
    Browse the repository at this point in the history
  3. -vv moved

    -vv added potentially in wrong place.
    nataliejschultz committed Jul 5, 2023
    Configuration menu
    Copy the full SHA
    ad62416 View commit details
    Browse the repository at this point in the history
  4. -vv

    trying one more location for the -vv command, to see if I can catch the error.
    nataliejschultz committed Jul 5, 2023
    Configuration menu
    Copy the full SHA
    a41e159 View commit details
    Browse the repository at this point in the history
  5. -x dockerfile

    trying to edit the dockerfile to output verbose.
    nataliejschultz committed Jul 5, 2023
    Configuration menu
    Copy the full SHA
    10d3c5f View commit details
    Browse the repository at this point in the history
  6. Error echo

    -x did not increase output info, so removed from dockerfile.
    
    Modifying setup_config to see if it will exit or echo. Also adding set -e at the top.
    nataliejschultz committed Jul 5, 2023
    Configuration menu
    Copy the full SHA
    1a77d6e View commit details
    Browse the repository at this point in the history
  7. exit 1 removed

    Remove exit 1 code and close if statement.
    nataliejschultz committed Jul 5, 2023
    Configuration menu
    Copy the full SHA
    02eb716 View commit details
    Browse the repository at this point in the history
  8. Set -e removed again

    set -e seems to cause the scrip to skip over the part where the error is occurring. Running regularly to see if it errors out.
    nataliejschultz committed Jul 5, 2023
    Configuration menu
    Copy the full SHA
    344aae0 View commit details
    Browse the repository at this point in the history
  9. no conda install

    seeing if the run fails without installing conda at all.
    nataliejschultz committed Jul 5, 2023
    Configuration menu
    Copy the full SHA
    a997298 View commit details
    Browse the repository at this point in the history

Commits on Jul 6, 2023

  1. Build failure test

    Test to make sure that build fails due to inability to set conda environment variable.
    nataliejschultz committed Jul 6, 2023
    Configuration menu
    Copy the full SHA
    dba05cf View commit details
    Browse the repository at this point in the history
  2. Fixing error?

    Found out that last error (created in dockerfile) was erroring every time. Created a version in the setup_config.sh script and have verified that it will succeed if run with enough memory. Making sure that it fails in GH actions due to low memory.
    nataliejschultz committed Jul 6, 2023
    Configuration menu
    Copy the full SHA
    d283f72 View commit details
    Browse the repository at this point in the history

Commits on Jul 7, 2023

  1. Set -e (again)

    testing set -e, yet again. Worked properly locally for some reason but historically hasn't worked in GH actions.
    nataliejschultz committed Jul 7, 2023
    Configuration menu
    Copy the full SHA
    3607b3e View commit details
    Browse the repository at this point in the history