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# This workflow will install Python dependencies, run tests the specified Python version | ||
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions | ||
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name: Python tests for pandas 2.2 | ||
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on: | ||
push: | ||
branches: | ||
- develop | ||
- develop-ref | ||
- feature_* | ||
- main_* | ||
- bugfix_* | ||
- issue_* | ||
- gha_* | ||
paths-ignore: | ||
- 'docs/**' | ||
- '.github/pull_request_template.md' | ||
- '.github/ISSUE_TEMPLATE/**' | ||
- '**/README.md' | ||
- '**/LICENSE.md' | ||
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pull_request: | ||
types: [ opened, reopened, synchronize ] | ||
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jobs: | ||
build: | ||
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runs-on: ubuntu-latest | ||
strategy: | ||
fail-fast: false | ||
matrix: | ||
python-version: [ "3.10" ] | ||
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steps: | ||
- uses: actions/checkout@v4 | ||
- name: Set up Python ${{ matrix.python-version }} | ||
uses: actions/setup-python@v5 | ||
with: | ||
python-version: ${{ matrix.python-version }} | ||
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- name: Retrieve METcalcpy repository develop branch | ||
run: | | ||
/usr/bin/git clone https://github.com/dtcenter/METcalcpy | ||
cd METcalcpy | ||
/usr/bin/git checkout develop | ||
python -m pip install -e . | ||
- name: Install dependencies | ||
run: | | ||
python -m pip install --upgrade pip | ||
python -m pip install pytest>=7.1.1 | ||
python -m pip install pytest_benchmark | ||
python -m pip install netcdf4==1.6.2 | ||
if [ -f requirements.txt ]; then pip install -r requirements.txt; fi | ||
python -m pip install pandas==2.2 | ||
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# Checking the branch name, not necessary but useful when setting things up. | ||
# - name: Extract branch name | ||
# shell: bash | ||
# run: echo "##[set-output name=branch;]$(echo ${GITHUB_REF#refs/heads/})" | ||
# id: extract_branch | ||
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- name: Test with pytest | ||
run: | | ||
echo "GITHUB wspace: $GITHUB_WORKSPACE" | ||
export PYTHONPATH=$GITHUB_WORKSPACE/:$GITHUB_WORKSPACE/METdbLoad:$GITHUB_WORKSPACE/METdbLoad/ush:$GITHUB_WORKSPACE/METreformat:$GITHUB_WORKSPACE/METreadnc | ||
echo "PYTHONPATH is $PYTHONPATH" | ||
cd $GITHUB_WORKSPACE/METreformat | ||
cd test | ||
py.test test_reformatting.py -v -s --benchmark-autosave > /home/runner/work/METdataio/METdataio/METreformat/test/.benchmarks/benchmark.log | ||
cd $GITHUB_WORKSPACE/METreadnc | ||
cd test | ||
pytest test_readnc.py | ||
echo "Finished unit tests" | ||
- name: Archive benchmark results | ||
uses: actions/upload-artifact@v4 | ||
with: | ||
name: benchmark-report | ||
path: /home/runner/work/METdataio/METdatio/METreformat/test/.benchmarks/benchmark.log |