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  1. COIN-modified COIN-modified Public

    A modification of the Bayesian COIN model of contextual learning for vector valued data

    Python

  2. abacus-gene/hhsd abacus-gene/hhsd Public

    HHSD is a python pipeline for hierarchical heuristic species delimitation using genomic sequence data under the multispecies coalescent model. It drives data analysis using the program bpp.

    Python 2

  3. ssd-simulator ssd-simulator Public

    A library for the simulation of clonal population dynamics on network structures using the ODEs or the Gillespie algorithm

    Jupyter Notebook