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  1. HER2-overexpression HER2-overexpression Public

    Prediction of HER2 overexpression status and IHC score as seen in "Predicting the HER2 status in esophageal cancer from tissue microarrays using convolutional neural networks".

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  2. DISK DISK Public

    Deep Imputation for Skeleton data

    Python 11 1

  3. worm-swin worm-swin Public

    Repository for WormSwin: Instance segmentation of C. elegans using vision transformer as appeared in Nature Scientific Reports 2023.

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  4. amap amap Public

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  5. lmagp lmagp Public

    Repository of the paper "Language models are good pathologists: using attention-based sequence reduction and text-pretrained transformers for efficient WSI classification"

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  6. amap-app amap-app Public

    AMAP-APP is a desktop application that leverages deep learning to performs segmentation and morphometry quantification of fluorescent microscopy images of podocytes.

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  • PIPNet Public Forked from M-Nauta/PIPNet

    PIP-Net: Patch-based Intuitive Prototypes Network for Interpretable Image Classification (CVPR 2023)

    bozeklab/PIPNet’s past year of commit activity
    Python 0 18 0 0 Updated Jul 23, 2024
  • histo-miner Public

    Code for the paper: histo-MINER

    bozeklab/histo-miner’s past year of commit activity
    Python 1 0 0 0 Updated Jul 19, 2024
  • DISK Public

    Deep Imputation for Skeleton data

    bozeklab/DISK’s past year of commit activity
    Python 11 MIT 1 0 0 Updated Jul 19, 2024
  • bozeklab/gbm-seg’s past year of commit activity
    Python 0 1 0 0 Updated Jul 14, 2024
  • dino-vit-features Public Forked from ShirAmir/dino-vit-features

    Official implementation for the paper "Deep ViT Features as Dense Visual Descriptors".

    bozeklab/dino-vit-features’s past year of commit activity
    Python 0 MIT 38 0 0 Updated Jul 1, 2024
  • lunaphore Public

    Scripts for the segmentation and analysis of images from the Sos lab

    bozeklab/lunaphore’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jun 19, 2024
  • ProtoPool Public Forked from gmum/ProtoPool

    Code for "Interpretable image classification with differentiable prototypes assignment", ECCV 2022

    bozeklab/ProtoPool’s past year of commit activity
    Python 0 MIT 6 0 0 Updated Jun 17, 2024
  • CellViT_v2 Public Forked from TIO-IKIM/CellViT

    CellViT: Vision Transformers for Precise Cell Segmentation and Classification

    bozeklab/CellViT_v2’s past year of commit activity
    Python 0 27 0 0 Updated Jun 17, 2024
  • CellViT Public Forked from TIO-IKIM/CellViT

    CellViT: Vision Transformers for Precise Cell Segmentation and Classification

    bozeklab/CellViT’s past year of commit activity
    Python 0 27 0 0 Updated Jun 3, 2024
  • GlomNet Public

    GlomNet: A HoVer Deep Learning Model for Glomerulus Instance Segmentation

    bozeklab/GlomNet’s past year of commit activity
    Python 0 1 0 0 Updated May 30, 2024

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