spin up docker

biolink · Nov 29, 2023 · 3927b14 · 3927b14
1 parent 6b6fb3c
commit 3927b14
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Showing 2 changed files with 20 additions and 4 deletions.
diff --git a/.github/workflows/check-dependencies.yaml b/.github/workflows/check-dependencies.yaml
@@ -39,7 +39,7 @@ jobs:
           rm -rf poetry.lock
           poetry install 
 
-      - name: Run tests
+      - name: Run bmt tests
         run: |
           make test
 
@@ -64,7 +64,7 @@ jobs:
         with:
           time: '45s'
 
-      - name: Run tests
+      - name: Run kgx tests
         run: |
           cd kgx
           poetry run make test
diff --git a/.github/workflows/initialize-toolkit-daily.yaml b/.github/workflows/initialize-toolkit-daily.yaml
@@ -37,7 +37,7 @@ jobs:
           rm -rf poetry.lock
           poetry install 
 
-      - name: Run tests
+      - name: Run bmt tests
         run: |
           make test
 
@@ -48,5 +48,21 @@ jobs:
           cd kgx
           poetry install  # this will install a different version of hdmf from the current one
           poetry remove bmt
-          poetry add ../bmt
+          ls -al ../
+          poetry add /home/runner/work/biolink-model-toolkit/biolink-model-toolkit
+
+      - name: Setup Neo4j Docker
+        run: |
+          cd kgx
+          docker run --detach --name kgx-neo4j-unit-test -p 8484:7474 -p 8888:7687 --env NEO4J_AUTH=neo4j/test neo4j:4.3.0
+          docker run --detach --name kgx-neo4j-integration-test -p 7474:7474 -p 7687:7687 --env NEO4J_AUTH=neo4j/test neo4j:4.3.0
+          docker ps -a
+      - name: Wait
+        uses: jakejarvis/wait-action@master
+        with:
+          time: '45s'
+
+      - name: Run kgx tests
+        run: |
+          cd kgx
           poetry run make test