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Besca 2.3

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@ajulienla ajulienla released this 24 Nov 14:53
0ae87c3

New implementations and bug fixes including:

New features:

  • number of hvgs now take into account the batches
  • geometric mean vs arithmetic mean
  • riverplot display to compare 2 categories

Dependencies:

  • Scanpy 1.6

Signatures and Nomenclatures

  • update of the neuron nomenclature
  • platelet signature added

Fixes:

  • bug fix in the pseudo bulk function
  • export fix for the FAIR export. cp10K exported to help upload in mongodb database (no dependency of the reformat C program)

Standard workflow:

  • Standard workflow renamed (from 2.0 to 2)
  • Standard workflow is automatically exported with the analysis name as an html file.