Besca 2.3
New implementations and bug fixes including:
New features:
- number of hvgs now take into account the batches
- geometric mean vs arithmetic mean
- riverplot display to compare 2 categories
Dependencies:
- Scanpy 1.6
Signatures and Nomenclatures
- update of the neuron nomenclature
- platelet signature added
Fixes:
- bug fix in the pseudo bulk function
- export fix for the FAIR export. cp10K exported to help upload in mongodb database (no dependency of the reformat C program)
Standard workflow:
- Standard workflow renamed (from 2.0 to 2)
- Standard workflow is automatically exported with the analysis name as an html file.