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@bcgsc

BC Cancer Canada's Michael Smith Genome Sciences Centre

Sequencing Centre for Genomics and Bioinformatics Research

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  1. RNA-Bloom RNA-Bloom Public

    🌺 reference-free transcriptome assembly for short and long reads

    Java 98 7

  2. LongStitch LongStitch Public

    Correct and scaffold assemblies using long reads

    Makefile 47 7

  3. ntRoot ntRoot Public

    🌳 Human ancestry inference from genomic data

    Python 6

  4. btllib btllib Public

    Bioinformatics Technology Lab common code library

    C++ 24 5

  5. ntEdit ntEdit Public

    ✏️ Genome assembly polishing & SNV detection

    C++ 64 9

  6. goldrush goldrush Public

    Linear-time de novo Long Read Assembler

    C++ 37 2

Repositories

Showing 10 of 116 repositories
  • pori_ipr_client Public

    Integrated Pipeline Reports (IPR) client. The web interface for the reporting application as part of PORI

    bcgsc/pori_ipr_client’s past year of commit activity
    TypeScript 8 GPL-3.0 1 0 2 Updated Dec 27, 2024
  • peekseq Public

    De novo protein-coding potential calculator using a k-mer approach

    bcgsc/peekseq’s past year of commit activity
    Perl 4 GPL-3.0 0 0 0 Updated Dec 27, 2024
  • pori_ipr_api Public

    Integrated Pipeline Reports (IPR) API, the reporting API as part of the PORI platform

    bcgsc/pori_ipr_api’s past year of commit activity
    JavaScript 8 0 0 5 Updated Dec 19, 2024
  • pori_graphkb_loader Public

    The Loaders for GraphKB. Imports content from external sources via the GraphKB REST API

    bcgsc/pori_graphkb_loader’s past year of commit activity
    JavaScript 6 GPL-3.0 4 12 3 Updated Dec 16, 2024
  • pori_python Public
    bcgsc/pori_python’s past year of commit activity
    Python 0 GPL-3.0 1 1 1 Updated Dec 14, 2024
  • btllib Public

    Bioinformatics Technology Lab common code library

    bcgsc/btllib’s past year of commit activity
    C++ 24 5 24 (1 issue needs help) 5 Updated Dec 4, 2024
  • tAMPer Public

    tAMPer: antimicrobial peptides toxicity prediction

    bcgsc/tAMPer’s past year of commit activity
    Jupyter Notebook 7 GPL-3.0 2 1 0 Updated Dec 4, 2024
  • ntRoot Public

    🌳 Human ancestry inference from genomic data

    bcgsc/ntRoot’s past year of commit activity
    Python 6 GPL-3.0 0 0 0 Updated Dec 3, 2024
  • ntEdit Public

    ✏️ Genome assembly polishing & SNV detection

    bcgsc/ntEdit’s past year of commit activity
    C++ 64 GPL-3.0 9 0 0 Updated Dec 3, 2024
  • goldrush Public

    Linear-time de novo Long Read Assembler

    bcgsc/goldrush’s past year of commit activity
    C++ 37 GPL-3.0 2 5 0 Updated Dec 2, 2024
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