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DE - coefficient vs contrasts #8

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lpantano opened this issue Apr 25, 2024 · 0 comments
Open

DE - coefficient vs contrasts #8

lpantano opened this issue Apr 25, 2024 · 0 comments
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enhancement New feature or request RNAseq

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@lpantano
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That said, when extracting results, it is best to use coefficients when you can. Using coefficients vs contrasts to extract results produces different results. Apeglm shrinkage method is incompatible with contrasts.
@lpantano lpantano added enhancement New feature or request RNAseq labels Apr 25, 2024
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