This repository includes a few sample scripts for review by hiring managers or selection committee. Please consider these as samples that I can share outside my group; these are just to give an idea and are not true indicator of my expertise in programming langugaes.
Study-specific (major) tools that I developed cannot be included here as those are only for internal use. I would encourage you to review my other public repositories as well - sPARTA and PHASIS
hairpin-PHAS.py: Script predicts novel hairpin-PHAS class from results generated by PHASIS
RNA-Seq.py: Small-, long-RNA pre-processing, ab-initio transcriptome assembly and expression profiling script
iSyTE2.Lumi.R: Script written for yet-unpublished iSyTE tool. Processes Illumina Microarray's data.
iSyTE2.Affy.R: Script written for yet-unpublished iSyTE tool. Processes Affymetrix Microarray's data.
iSyTENet.R: Script written for yet-unpublished iSyTE tool. Constructs co-expression based gene networks.
Plots_samples.R : Script shows some samples of plots that I made for my research.
These scripts belongs to Prof. Meyers (Donald Danforth Plant Science Centre) and Dr. Lachke (University of Delaware) Lab.