Name		Name	Last commit message	Last commit date
Latest commit History 19 Commits
Fastq2CA.sh		Fastq2CA.sh
GuessEncoding.sh		GuessEncoding.sh
JobBLAST.sh		JobBLAST.sh
JobQ.sh		JobQ.sh
JobR.sh		JobR.sh
JobR_BLAST.sh		JobR_BLAST.sh
JobTime.sh		JobTime.sh
JobTime2.sh		JobTime2.sh
Khmer_interleave.sh		Khmer_interleave.sh
N50Calc.pl		N50Calc.pl
README.md		README.md
SRAfq2FASTQ.sh		SRAfq2FASTQ.sh
a_loghistory_func.sh		a_loghistory_func.sh
a_longhistory_func.sh		a_longhistory_func.sh
abacas.1.3.1.pl		abacas.1.3.1.pl
acd_func.sh		acd_func.sh
assemblathon_stats.pl		assemblathon_stats.pl
bayes_script.sh		bayes_script.sh
biostar		biostar
biostar.cpp		biostar.cpp
blast_job_gen.sh		blast_job_gen.sh
blast_wrapper.sh		blast_wrapper.sh
bowtie2_se_noclip.sh		bowtie2_se_noclip.sh
bwa_map_sort.sh		bwa_map_sort.sh
cegma.sh		cegma.sh
checkBlastStatus.sh		checkBlastStatus.sh
clean_trinity.sh		clean_trinity.sh
count.sh		count.sh
count_fastq.sh		count_fastq.sh
create_sam.sh		create_sam.sh
dos2unix		dos2unix
edit_sam_files.sh		edit_sam_files.sh
end_time.sh		end_time.sh
extract_seq.sh		extract_seq.sh
extract_seq.sh.save		extract_seq.sh.save
fasta-splitter.pl		fasta-splitter.pl
fasta_distribution.pl		fasta_distribution.pl
fasta_lenght.py		fasta_lenght.py
fastarange		fastarange
fastarange.c		fastarange.c
fastasplitn		fastasplitn
fastasplitn.c		fastasplitn.c
fastqc_stats.sh		fastqc_stats.sh
fasttrans		fasttrans
fasttrans.c		fasttrans.c
fna_qual2fastq.py		fna_qual2fastq.py
fq2bam.sh		fq2bam.sh
genes_blast.txt		genes_blast.txt
genes_geneid.txt		genes_geneid.txt
genes_genewise.txt		genes_genewise.txt
gff2gtf.R		gff2gtf.R
gmap_cdna.sh		gmap_cdna.sh
gsize.sh		gsize.sh
gsnap_pe.sh		gsnap_pe.sh
gsnap_pe2.sh		gsnap_pe2.sh
gsnap_pe_clip_final.sh		gsnap_pe_clip_final.sh
gsnap_pe_noclip.sh		gsnap_pe_noclip.sh
gsnap_pe_noclip_final.sh		gsnap_pe_noclip_final.sh
gsnap_se.sh		gsnap_se.sh
gsnap_stats.sh		gsnap_stats.sh
gtf2gff3.pl		gtf2gff3.pl
guess_encoding.py		guess_encoding.py
header_replace_fasta.pl		header_replace_fasta.pl
htseq_count.sh		htseq_count.sh
join.pl		join.pl
join_files.sh		join_files.sh
khmer_pe.sh		khmer_pe.sh
mac2unix		mac2unix
mayday.sh		mayday.sh
mpblast.pl		mpblast.pl
parse.sh		parse.sh
pb_errc.sh		pb_errc.sh
pb_errc2.sh		pb_errc2.sh
qiime_config.sh		qiime_config.sh
qourum_ec.sh		qourum_ec.sh
quedel.sh		quedel.sh
renamed_results.sh		renamed_results.sh
rsem_analyize_dge.sh		rsem_analyize_dge.sh
rsem_dge.sh		rsem_dge.sh
rsem_estm_matrix.sh		rsem_estm_matrix.sh
runBayesScan.sh		runBayesScan.sh
sample_fastq.py		sample_fastq.py
seprate_paired_reads.sh		seprate_paired_reads.sh
split_submit.sh		split_submit.sh
summary.sh		summary.sh
test_bioperl.pl		test_bioperl.pl
tophat_se.sh		tophat_se.sh
trim_pe.sh		trim_pe.sh
trim_se.sh		trim_se.sh
unix2dos		unix2dos
unix2mac		unix2mac
validate_features.pl		validate_features.pl