Here is the wiki for the imaging project: https://github.com/WEHI-ResearchComputing/Imaging-Getting-Started/wiki

Dependencies

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How to run using nextflow:

1. cd Galaxy-Integration/nextflow-script
2. nextflow run main.nf

How to run Customised GUI:

1. cd Galaxy-Integration
2. python app.py
3. Click on the link appeared on terminal http://127.0.0.1:5000

How to rebuild frontend:

1. cd Galaxy-Integration/galaxy-web
2. Ensure you have installed npm: npm install -g @vue/cli
3. npm run build