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Merge pull request #38 from TheELNConsortium/sb_github_actions
validator using pypi's rocrate
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name: pypi_rocrate | ||
# Validate if rocrate of pypi can open and parse it | ||
# https://pypi.org/project/rocrate/ | ||
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on: [ push ] | ||
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jobs: | ||
build: | ||
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runs-on: ubuntu-latest | ||
strategy: | ||
matrix: | ||
python-version: [ "3.10" ] | ||
steps: | ||
- uses: actions/checkout@v3 | ||
- name: Install dependencies | ||
run: | | ||
python -m pip install --upgrade pip | ||
pip install rocrate | ||
- name: validate | ||
run: | | ||
import os | ||
import sys | ||
import tempfile | ||
from pathlib import Path | ||
from zipfile import ZIP_DEFLATED | ||
from zipfile import Path as ZPath | ||
from zipfile import ZipFile | ||
from rocrate.rocrate import ROCrate | ||
from rocrate.model.entity import Entity | ||
from rocrate.model.contextentity import ContextEntity | ||
success = 0 | ||
for root, _, files in os.walk(".", topdown=False): | ||
for name in files: | ||
if not name.endswith('.eln'): | ||
continue | ||
fileName = os.path.join(root, name) | ||
print(f'\n\nTry to parse: {fileName}') | ||
with ZipFile(fileName, 'r', compression=ZIP_DEFLATED) as elnFile: | ||
p = ZPath(elnFile) | ||
dirName = sorted(p.iterdir())[0] | ||
try: | ||
dirpath = Path(tempfile.mkdtemp()) | ||
elnFile.extractall(dirpath) | ||
temppath= dirpath.joinpath(dirName.name) | ||
crate = ROCrate(temppath) | ||
for e in crate.get_entities(): | ||
print(f' {e.id}: {e.type}') | ||
except Exception: | ||
print(" ***** ERROR: Could not parse content of this file!! *****") | ||
success = 1 | ||
sys.exit(success) | ||
shell: python |