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@SuLab

Su Lab

Code repos for the Su Lab at The Scripps Research Institute

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  1. WikidataIntegrator WikidataIntegrator Public

    A Wikidata Python module integrating the MediaWiki API and the Wikidata SPARQL endpoint

    Python 247 47

  2. DrugMechDB DrugMechDB Public

    A database of paths that represent the mechanism of action from a drug to a disease in an indication.

    Jupyter Notebook 57 18

  3. Applied-Bioinformatics Applied-Bioinformatics Public

    Student course material for the Applied Bioinformatics course at Scripps Research

    Jupyter Notebook 35 32

  4. YPet YPet Public

    Javascript library to rapidly annotate paragraphs of text on websites with the goal of making the annotation process as fast and simple as possible.

    JavaScript 31 3

  5. mark2cure mark2cure Public

    Mark2Cure allows anyone that can read English, regardless of background, to help in the process of biomedical discovery.

    Python 14 8

  6. sparql_to_pandas sparql_to_pandas Public

    Example for accessing SPARQL endpoints in Python with Pandas

    Jupyter Notebook 13 9

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