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update examples

update examples #422

name: conda-deployment
on: [push]
jobs:
Main-package:
runs-on: ${{ matrix.os }}
strategy:
matrix:
os: [ubuntu-latest]
python-version: ["3.12"]
env:
OS: ${{ matrix.os }}
steps:
- uses: actions/checkout@v4
- uses: conda-incubator/setup-miniconda@v3
with:
mamba-version: "*"
use-mamba: true
auto-update-conda: false
auto-activate-base: false
environment-file: environment.yml
activate-environment: test
python-version: ${{ matrix.python-version }}
channels: conda-forge,defaults
channel-priority: true
show-channel-urls: true
- name: Install dev-dependencies
run: |
pip install .[dev] --no-deps
- name: Generate coverage report
shell: bash -el {0}
run: |
conda info
conda list
conda config --show-sources
conda config --show
pytest -sv -m "not plot"
Optional-packages:
runs-on: ${{ matrix.os }}
strategy:
matrix:
os: [ubuntu-latest]
python-version: ["3.12"]
env:
OS: ${{ matrix.os }}
steps:
- uses: actions/checkout@v4
- uses: conda-incubator/setup-miniconda@v3
with:
mamba-version: "*"
use-mamba: true
auto-update-conda: false
auto-activate-base: false
environment-file: environment-optional-packages.yml
activate-environment: test
python-version: ${{ matrix.python-version }}
channels: conda-forge,defaults
channel-priority: true
show-channel-urls: true
- name: Install dev-dependencies
run: |
pip install .[dev]
- name: Generate coverage report
shell: bash -el {0}
run: |
conda activate test
conda info
conda list
conda config --show-sources
conda config --show
pytest -sv
- name: test Jupyter notebook
shell: bash -el {0}
run: |
conda activate test
pip install .
pytest --nbval -k ".ipynb"