update nc suffix in atm_jjob var and ens ctests, generalize atm and e… #160

	name: Unit Tests
	on: [push, pull_request]

	jobs:
	ctests:
	runs-on: ubuntu-latest
	name: Run Unit Tests with ctest

	steps:

	- name: Install pip dependencies
	run: \|
	pip install --upgrade pip
	pip install pycodestyle
	pip install netCDF4
	pip install xarray

	- name: Checkout wxflow
	uses: actions/checkout@v3
	with:
	repository: NOAA-EMC/wxflow
	ref: develop
	path: wxflow

	- name: Install wxflow
	run: \|
	cd wxflow
	pip install .

	- name: Checkout
	uses: actions/checkout@v2
	with:
	path: GDASApp

	- name: Install ecBuild
	run: \|
	git clone https://github.com/ecmwf/ecbuild.git ecbuild
	cd ecbuild
	git checkout 3.6.1
	mkdir bootstrap
	cd bootstrap
	../bin/ecbuild ..
	sudo make install

	- name: Configure with cmake
	run: \|
	mkdir $GITHUB_WORKSPACE/build && cd $GITHUB_WORKSPACE/build
	cmake -DBUILD_GDASBUNDLE=OFF $GITHUB_WORKSPACE/GDASApp

	- name: Build GDASApp
	run: \|
	cd $GITHUB_WORKSPACE/build
	make

	- name: Run ctest
	run: \|
	cd $GITHUB_WORKSPACE/build
	ctest --output-on-failure

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