linux-64 - rebuild Christmas 2024 - switch to rattler-build

[traversaro]

Just an attempt, heavily based on:

• Linux_64 - rebuild September 2024 #206
• CI: osx and osx_arm64 ros-jazzy#5

[traversaro]

New build error:

 │ │ [5/36] Building CXX object CMakeFiles/cartographer_ros.dir/src/ros_log_sink.cpp.o
 │ │ FAILED: CMakeFiles/cartographer_ros.dir/src/ros_log_sink.cpp.o
 │ │ $BUILD_PREFIX/bin/x86_64-conda-linux-gnu-c++ -DBOOST_FILESYSTEM_DYN_LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_SYSTEM_ │ │ DYN_LINK -DBOOST_SYSTEM_NO_LIB -DDEFAULT_RMW_IMPLEMENTATION=rmw_fastrtps_cpp -DEIGEN_HAS_CXX17_OVERALIGN=0 -DGFLAGS_IS_A_DLL=0 -DGLOG_USE_GFLAGS -DGLOG_USE_GLOG_EXPOR │ │ T -DPROTOBUF_USE_DLLS -DTINYXML2_IMPORT -D_FILE_OFFSET_BITS=64 -Dcartographer_ros_EXPORTS -I$SRC_DIR/ros-humble-cartographer-ros/src/work/include -I$PREFIX/lib/urdfdo │ │ m_headers/cmake/../../../include/urdfdom_headers -I$PREFIX/include/pcl_conversions -isystem $PREFIX/include/eigen3 -isystem $PREFIX/include/pcl-1.14 -isystem $PREFIX/ │ │ include/builtin_interfaces -isystem $PREFIX/include/cartographer_ros_msgs -isystem $PREFIX/include/geometry_msgs -isystem $PREFIX/include/nav_msgs -isystem $PREFIX/in │ │ clude/rclcpp -isystem $PREFIX/include/sensor_msgs -isystem $PREFIX/include/std_msgs -isystem $PREFIX/include/tf2 -isystem $PREFIX/include/tf2_eigen -isystem $PREFIX/i │ │ nclude/tf2_msgs -isystem $PREFIX/include/tf2_ros -isystem $PREFIX/include/visualization_msgs -isystem $PREFIX/include/rosbag2_cpp -isystem $PREFIX/include/rosbag2_sto │ │ rage -isystem $PREFIX/include/urdf -isystem $PREFIX/include/urdfdom -isystem $PREFIX/include/message_filters -isystem $PREFIX/include/pcl_msgs -isystem $PREFIX/includ │ │ e/rosidl_runtime_c -isystem $PREFIX/include/rcutils -isystem $PREFIX/include/rosidl_typesupport_interface -isystem $PREFIX/include/rosidl_runtime_cpp -isystem $PREFIX │ │ /include/rosidl_typesupport_fastrtps_cpp -isystem $PREFIX/include/rmw -isystem $PREFIX/include/rosidl_typesupport_fastrtps_c -isystem $PREFIX/include/rosidl_typesuppo │ │ rt_introspection_c -isystem $PREFIX/include/rosidl_typesupport_introspection_cpp -isystem $PREFIX/include/ament_index_cpp -isystem $PREFIX/include/libstatistics_colle │ │ ctor -isystem $PREFIX/include/rcl -isystem $PREFIX/include/rcl_interfaces -isystem $PREFIX/include/rcl_logging_interface -isystem $PREFIX/include/rcl_yaml_param_parse │ │ r -isystem $PREFIX/include/tracetools -isystem $PREFIX/include/rcpputils -isystem $PREFIX/include/statistics_msgs -isystem $PREFIX/include/rosgraph_msgs -isystem $PRE │ │ FIX/include/rosidl_typesupport_cpp -isystem $PREFIX/include/rosidl_typesupport_c -isystem $PREFIX/include/rclcpp_action -isystem $PREFIX/include/action_msgs -isystem  │ │ $PREFIX/include/unique_identifier_msgs -isystem $PREFIX/include/rcl_action -isystem $PREFIX/include/pluginlib -isystem $PREFIX/include/class_loader -isystem $PREFIX/i │ │ nclude/urdf_parser_plugin -isystem $PREFIX/include/urdfdom_headers -fvisibility-inlines-hidden -fmessage-length=0 -march=nocona -mtune=haswell -ftree-vectorize -fPIC  │ │ -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem $PREFIX/include -fdebug-prefix-map=$SRC_DIR=/usr/local/src/conda/ros-humble-cartographer-ros- │ │ 2.0.9002 -fdebug-prefix-map=$PREFIX=/usr/local/src/conda-prefix -D__STDC_FORMAT_MACROS=1 -O3 -DNDEBUG -std=gnu++17 -fPIC -fdiagnostics-color=always -Wall -Wextra -MD  │ │ -MT CMakeFiles/cartographer_ros.dir/src/ros_log_sink.cpp.o -MF CMakeFiles/cartographer_ros.dir/src/ros_log_sink.cpp.o.d -o CMakeFiles/cartographer_ros.dir/src/ros_log │ │ _sink.cpp.o -c $SRC_DIR/ros-humble-cartographer-ros/src/work/src/ros_log_sink.cpp
 │ │ $SRC_DIR/ros-humble-cartographer-ros/src/work/src/ros_log_sink.cpp: In member function 'virtual void cartographer_ros::ScopedRosLogSink::send(google::LogSeverity, con │ │ st char*, const char*, int, const tm*, const char*, size_t)':
 │ │ $SRC_DIR/ros-humble-cartographer-ros/src/work/src/ros_log_sink.cpp:57:79: error: no matching function for call to 'google::LogMessageTime::LogMessageTime(const tm&)'
 │ │    57 |       severity, GetBasename(filename), line, ::google::LogMessageTime(*tm_time), message, message_len);
 │ │       |                                                                               ^
 │ │ In file included from $SRC_DIR/ros-humble-cartographer-ros/src/work/include/cartographer_ros/ros_log_sink.h:22,
 │ │                  from $SRC_DIR/ros-humble-cartographer-ros/src/work/src/ros_log_sink.cpp:17:
 │ │    83 |   LogMessageTime();
 │ │       |   ^~~~~~~~~~~~~~
 │ │ $PREFIX/include/glog/logging.h:83:3: note:   candidate expects 0 arguments, 1 provided
 │ │ $PREFIX/include/glog/logging.h:82:20: note: candidate: 'constexpr google::LogMessageTime::LogMessageTime(const google::LogMessageTime&)'
 │ │    82 | struct GLOG_EXPORT LogMessageTime {
 │ │       |                    ^~~~~~~~~~~~~~
 │ │ $PREFIX/include/glog/logging.h:82:20: note:   no known conversion for argument 1 from 'const tm' to 'const google::LogMessageTime&'
 │ │ $PREFIX/include/glog/logging.h:82:20: note: candidate: 'constexpr google::LogMessageTime::LogMessageTime(google::LogMessageTime&&)'
 │ │ $PREFIX/include/glog/logging.h:82:20: note:   no known conversion for argument 1 from 'const tm' to 'google::LogMessageTime&&'
 │ │ [6/36] Building CXX object CMakeFiles/cartographer_ros.dir/src/time_conversion.cpp.o
 │ │ [7/36] Building CXX object CMakeFiles/cartographer_ros.dir/src/ros_map.cpp.o
 │ │ [8/36] Building CXX object CMakeFiles/cartographer_ros.dir/src/ros_map_writing_points_processor.cpp.o
 │ │ [9/36] Building CXX object CMakeFiles/cartographer_ros.dir/src/node_options.cpp.o
 │ │ [10/36] Building CXX object CMakeFiles/cartographer_ros.dir/src/playable_bag.cpp.o
 │ │ [11/36] Building CXX object CMakeFiles/cartographer_ros.dir/src/trajectory_options.cpp.o
 │ │ [12/36] Building CXX object CMakeFiles/cartographer_offline_node.dir/src/offline_node_main.cpp.o
 │ │ [13/36] Building CXX object CMakeFiles/cartographer_ros.dir/src/tf_bridge.cpp.o
 │ │ [14/36] Building CXX object CMakeFiles/cartographer_ros.dir/src/urdf_reader.cpp.o
 │ │ [15/36] Building CXX object CMakeFiles/cartographer_pbstream_to_ros_map.dir/src/pbstream_to_ros_map_main.cpp.o
 │ │ [16/36] Building CXX object CMakeFiles/cartographer_ros.dir/src/submap.cpp.o
 │ │ [17/36] Building CXX object CMakeFiles/cartographer_ros.dir/src/sensor_bridge.cpp.o
 │ │ [18/36] Building CXX object CMakeFiles/cartographer_node.dir/src/node_main.cpp.o
 │ │ [19/36] Building CXX object CMakeFiles/cartographer_pbstream_map_publisher.dir/src/pbstream_map_publisher_main.cpp.o
 │ │ [20/36] Building CXX object CMakeFiles/cartographer_assets_writer.dir/src/assets_writer_main.cpp.o
 │ │ [20/36] Building CXX object CMakeFiles/cartographer_assets_writer.dir/src/assets_writer_main.cpp.o
 │ │       |   ^~~~~~~~~~~~~~
 │ │ $PREFIX/include/glog/logging.h:83:3: note:   candidate expects 0 arguments, 1 provided
 │ │ $PREFIX/include/glog/logging.h:82:20: note: candidate: 'constexpr google::LogMessageTime::LogMessageTime(const google::LogMessageTime&)'
 │ │    82 | struct GLOG_EXPORT LogMessageTime {
 │ │       |                    ^~~~~~~~~~~~~~
 │ │ $PREFIX/include/glog/logging.h:82:20: note:   no known conversion for argument 1 from 'const tm' to 'const google::LogMessageTime&'
 │ │ $PREFIX/include/glog/logging.h:82:20: note: candidate: 'constexpr google::LogMessageTime::LogMessageTime(google::LogMessageTime&&)'
 │ │ $PREFIX/include/glog/logging.h:82:20: note:   no known conversion for argument 1 from 'const tm' to 'google::LogMessageTime&&'
 │ │ [6/36] Building CXX object CMakeFiles/cartographer_ros.dir/src/time_conversion.cpp.o
 │ │ [7/36] Building CXX object CMakeFiles/cartographer_ros.dir/src/ros_map.cpp.o
 │ │ [8/36] Building CXX object CMakeFiles/cartographer_ros.dir/src/ros_map_writing_points_processor.cpp.o
 │ │ [9/36] Building CXX object CMakeFiles/cartographer_ros.dir/src/node_options.cpp.o
 │ │ [10/36] Building CXX object CMakeFiles/cartographer_ros.dir/src/playable_bag.cpp.o
 │ │ [11/36] Building CXX object CMakeFiles/cartographer_ros.dir/src/trajectory_options.cpp.o
 │ │ [12/36] Building CXX object CMakeFiles/cartographer_offline_node.dir/src/offline_node_main.cpp.o
 │ │ [13/36] Building CXX object CMakeFiles/cartographer_ros.dir/src/tf_bridge.cpp.o
 │ │ [14/36] Building CXX object CMakeFiles/cartographer_ros.dir/src/urdf_reader.cpp.o
 │ │ [15/36] Building CXX object CMakeFiles/cartographer_pbstream_to_ros_map.dir/src/pbstream_to_ros_map_main.cpp.o
 │ │ [16/36] Building CXX object CMakeFiles/cartographer_ros.dir/src/submap.cpp.o
 │ │ [17/36] Building CXX object CMakeFiles/cartographer_ros.dir/src/sensor_bridge.cpp.o
 │ │ [18/36] Building CXX object CMakeFiles/cartographer_node.dir/src/node_main.cpp.o
 │ │ [19/36] Building CXX object CMakeFiles/cartographer_pbstream_map_publisher.dir/src/pbstream_map_publisher_main.cpp.o
 │ │ [20/36] Building CXX object CMakeFiles/cartographer_assets_writer.dir/src/assets_writer_main.cpp.o
 │ │ [21/36] Building CXX object CMakeFiles/cartographer_ros.dir/src/map_builder_bridge.cpp.o
 │ │ [22/36] Building CXX object CMakeFiles/cartographer_ros.dir/src/msg_conversion.cpp.o
 │ │ [23/36] Building CXX object CMakeFiles/cartographer_ros.dir/src/assets_writer.cpp.o
 │ │ [24/36] Building CXX object CMakeFiles/cartographer_rosbag_validate.dir/src/rosbag_validate_main.cpp.o
 │ │ [25/36] Building CXX object CMakeFiles/cartographer_occupancy_grid_node.dir/src/occupancy_grid_node_main.cpp.o
 │ │ [26/36] Building CXX object CMakeFiles/cartographer_ros.dir/src/offline_node.cpp.o
 │ │ [27/36] Building CXX object CMakeFiles/cartographer_ros.dir/src/node.cpp.o
 │ │ ninja: build stopped: subcommand failed.
 │ │ × error Script failed with status 1
 │ │ × error Work directory: '/home/straversaro-iit.local/ros-humble/output/bld/rattler-build_ros-humble-cartographer-ros_1734615861/work'
 │ │ × error To debug the build, run it manually in the work directory (execute the `./conda_build.sh` or `conda_build.bat` script)
 │ │
 │ ╰─────────────────── (took 41 seconds)
 │
 ╰─────────────────── (took 45 seconds)
Error:

[traversaro]

Upstream issue: cartographer-project/cartographer_ros#1741 .

[traversaro]

Upstream issue: cartographer-project/cartographer_ros#1741 .

Fix proposed in ros2/cartographer_ros#76 and backported in a local patch.

[traversaro]

rqt-image-view failure (but I think it is a problem of rqt_gui_cpp):

 │ │ -- Found Threads: TRUE
 │ │ -- Found qt_gui_cpp: 2.2.3 ($PREFIX/share/qt_gui_cpp/cmake)
 │ │ -- Found rqt_gui_cpp: 1.1.7 ($PREFIX/share/rqt_gui_cpp/cmake)
 │ │ -- Found image_transport: 3.1.10 ($PREFIX/share/image_transport/cmake)
 │ │ -- Found cv_bridge: 3.2.1 ($PREFIX/share/cv_bridge/cmake)
 │ │ -- Configuring done (2.2s)
 │ │ CMake Error in CMakeLists.txt:
 │ │   Imported target "rqt_gui_cpp::rqt_gui_cpp" includes non-existent path
 │ │     "{CONDA_BUILD_SYSROOT}/usr/include"
 │ │   in its INTERFACE_INCLUDE_DIRECTORIES.  Possible reasons include:
 │ │   * The path was deleted, renamed, or moved to another location.
 │ │   * An install or uninstall procedure did not complete successfully.
 │ │   * The installation package was faulty and references files it does not
 │ │   provide.
 │ │
 │ │ CMake Warning:
 │ │ -- Generating done (0.0s)
 │ │   Manually-specified variables were not used by the project:
 │ │     AMENT_PREFIX_PATH
 │ │     CATKIN_SKIP_TESTING
 │ │     CMAKE_INSTALL_LIBDIR
 │ │     CMAKE_INSTALL_SYSTEM_RUNTIME_LIBS_SKIP
 │ │     PYTHON_EXECUTABLE
 │ │     PYTHON_INSTALL_DIR
 │ │     Python_EXECUTABLE
 │ │     SETUPTOOLS_DEB_LAYOUT
 │ │
 │ │ CMake Generate step failed.  Build files cannot be regenerated correctly.
 │ │ ninja: error: loading 'build.ninja': No such file or directory

[Tobias-Fischer]

Thanks for all your work @traversaro!

This problem used to be taken care off by https://github.com/traversaro/ros-humble/blob/71d4b56a3654a6e1e2fedb8f29ed9769065f284a/conda_build_config.yaml#L33 - I’m not sure if rattler-build offers this functionality yet @wolfv?

[traversaro]

Something that we could try is to get rid of most x11 and OpenGL packages and just use regular packages now that are available, this may remove the need for that.

[Tobias-Fischer]

Something that we could try is to get rid of most x11 and OpenGL packages and just use regular packages now that are available, this may remove the need for that.

I was just about to say exactly this :)

[wolfv]

Yes I added this functionality to rattler build. In the jazzy repo you should find an example. It's in the recipe though, not in the variant config

[traversaro]

New error:

 │ │ [1/11] Building CXX object CMakeFiles/rosx_introspection.dir/src/ros_parser.cpp.o
 │ │ FAILED: CMakeFiles/rosx_introspection.dir/src/ros_parser.cpp.o
 │ │ $BUILD_PREFIX/bin/x86_64-conda-linux-gnu-c++ -DDEFAULT_RMW_IMPLEMENTATION=rmw_fastrtps_cpp -DTINYXML2_IMPORT -D_FIL
 │ │ E_OFFSET_BITS=64 -Drosx_introspection_EXPORTS -I$SRC_DIR/ros-humble-rosx-introspection/src/work/include -isystem $P
 │ │ REFIX/include/ament_index_cpp -isystem $PREFIX/include/rclcpp -isystem $PREFIX/include/rosbag2_cpp -isystem $PREFIX
 │ │ /include/libstatistics_collector -isystem $PREFIX/include/builtin_interfaces -isystem $PREFIX/include/rosidl_runtim
 │ │ e_c -isystem $PREFIX/include/rcutils -isystem $PREFIX/include/rosidl_typesupport_interface -isystem $PREFIX/include
 │ │ /rosidl_runtime_cpp -isystem $PREFIX/include/rosidl_typesupport_fastrtps_cpp -isystem $PREFIX/include/rmw -isystem
 │ │ $PREFIX/include/rosidl_typesupport_fastrtps_c -isystem $PREFIX/include/rosidl_typesupport_introspection_c -isystem
 │ │ $PREFIX/include/rosidl_typesupport_introspection_cpp -isystem $PREFIX/include/rcl -isystem $PREFIX/include/rcl_inte
 │ │ rfaces -isystem $PREFIX/include/rcl_logging_interface -isystem $PREFIX/include/rcl_yaml_param_parser -isystem $PREF
 │ │ IX/include/tracetools -isystem $PREFIX/include/rcpputils -isystem $PREFIX/include/statistics_msgs -isystem $PREFIX/
 │ │ include/rosgraph_msgs -isystem $PREFIX/include/rosidl_typesupport_cpp -isystem $PREFIX/include/rosidl_typesupport_c
 │ │  -isystem $PREFIX/include/pluginlib -isystem $PREFIX/include/class_loader -isystem $PREFIX/include/rosbag2_storage
 │ │ -fvisibility-inlines-hidden -fmessage-length=0 -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protecto
 │ │ r-strong -fno-plt -O2 -ffunction-sections -pipe -isystem $PREFIX/include -fdebug-prefix-map=$SRC_DIR=/usr/local/src
 │ │ /conda/ros-humble-rosx-introspection-1.0.2 -fdebug-prefix-map=$PREFIX=/usr/local/src/conda-prefix -D__STDC_FORMAT_M
 │ │ ACROS=1 -O3 -DNDEBUG -fPIC -fdiagnostics-color=always -MD -MT CMakeFiles/rosx_introspection.dir/src/ros_parser.cpp.
 │ │ o -MF CMakeFiles/rosx_introspection.dir/src/ros_parser.cpp.o.d -o CMakeFiles/rosx_introspection.dir/src/ros_parser.
 │ │ cpp.o -c $SRC_DIR/ros-humble-rosx-introspection/src/work/src/ros_parser.cpp
 │ │ $SRC_DIR/ros-humble-rosx-introspection/src/work/src/ros_parser.cpp:29:10: fatal error: rapidjson/document.h: No suc
 │ │ h file or directory
 │ │    29 | #include "rapidjson/document.h"
 │ │       |          ^~~~~~~~~~~~~~~~~~~~~~
 │ │ compilation terminated.
 │ │ [2/11] Building CXX object CMakeFiles/rosx_introspection.dir/src/stringtree_leaf.cpp.o
 │ │ [3/11] Building CXX object CMakeFiles/rosx_introspection.dir/src/deserializer.cpp.o
 │ │ [4/11] Building CXX object CMakeFiles/rosx_introspection.dir/src/ros_type.cpp.o
 │ │ [5/11] Building CXX object CMakeFiles/rosx_introspection.dir/src/serializer.cpp.o
 │ │ [6/11] Building CXX object CMakeFiles/rosx_introspection.dir/src/ros_utils/ros2_helpers.cpp.o
 │ │ [7/11] Building CXX object CMakeFiles/rosx_introspection.dir/src/ros_field.cpp.o
 │ │ [8/11] Building CXX object CMakeFiles/rosx_introspection.dir/src/ros_utils/message_definition_cache.cpp.o
 │ │ [9/11] Building CXX object CMakeFiles/rosx_introspection.dir/src/ros_message.cpp.o
 │ │ ninja: build stopped: subcommand failed.
 │ │ × error Script failed with status 1
 │ │ × error Work directory: '/home/straversaro-iit.local/ros-humble/output/bld/rattler-build_ros-humble-rosx-introspecti
 │ │ × error on_1734640695/work'
 │ │ × error To debug the build, run it manually in the work directory (execute the `./conda_build.sh` or `conda_build.ba
 │ │ × error t` script)

[Tobias-Fischer]

Are we just missing the mapping in https://github.com/traversaro/ros-humble/blob/rebuild-christmas-2024-linux-64-rattler-build/robostack.yaml?

[Tobias-Fischer]

+The upstream https://github.com/facontidavide/rosx_introspection/blob/master/CMakeLists.txt does not include the required target_link_libraries etc for rapidjson

[traversaro]

Are we just missing the mapping in https://github.com/traversaro/ros-humble/blob/rebuild-christmas-2024-linux-64-rattler-build/robostack.yaml?

Yes, 1127826 .

[traversaro]

+The upstream https://github.com/facontidavide/rosx_introspection/blob/master/CMakeLists.txt does not include the required target_link_libraries etc for rapidjson

Yes, but the dependency is header-only, so I think it will work without CMake modifications.

[traversaro]

 │ │ -- Found motion_capture_tracking_interfaces: 1.0.5 ($PREFIX/share/motion_capture_tracking_interfaces/cmake)
 │ │ -- Found eigen3_cmake_module: 0.1.1 ($PREFIX/share/eigen3_cmake_module/cmake)
 │ │ -- Found Eigen3: TRUE (found version "3.4.0")
 │ │ CMake Warning (dev) at $PREFIX/share/pcl-1.14/PCLConfig.cmake:121 (find_package):
 │ │   Policy CMP0167 is not set: The FindBoost module is removed.  Run "cmake
 │ │   --help-policy CMP0167" for policy details.  Use the cmake_policy command to
 │ │   set the policy and suppress this warning.
 │ │ Call Stack (most recent call first):
 │ │   $PREFIX/share/pcl-1.14/PCLConfig.cmake:294 (find_boost)
 │ │   $PREFIX/share/pcl-1.14/PCLConfig.cmake:559 (find_external_library)
 │ │   CMakeLists.txt:19 (find_package)
 │ │ This warning is for project developers.  Use -Wno-dev to suppress it.
 │ │
 │ │ -- Could NOT find Boost (missing: Boost_INCLUDE_DIR system iostreams filesystem) (Required is at least version "1.65.0")
 │ │ CMake Error at $PREFIX/share/pcl-1.14/PCLConfig.cmake:59 (message):
 │ │   common is required but boost was not found
 │ │ Call Stack (most recent call first):
 │ │   $PREFIX/share/pcl-1.14/PCLConfig.cmake:370 (pcl_report_not_found)
 │ │   $PREFIX/share/pcl-1.14/PCLConfig.cmake:559 (find_external_library)
 │ │   CMakeLists.txt:19 (find_package)
 │ │
 │ │ -- Configuring incomplete, errors occurred!
 │ │ ninja: error: loading 'build.ninja': No such file or directory
 │ │ × error Script failed with status 1
 │ │ × error Work directory: '/home/straversaro-iit.local/ros-humble/output/bld/rattler-build_ros-humble-motion-capture-tracking_1734641871/work'
 │ │ × error To debug the build, run it manually in the work directory (execute the `./conda_build.sh` or `conda_build.bat` script)

This is a missing aspect of PCL packaging in conda-forge, as we do not have a pcl-devel that can depend on libboost-devel. I think we can just add this transitive dependency manually.

[traversaro]

 │ │ -- Build files have been written to: $SRC_DIR/build
 │ │ [1/9] Building CXX object CMakeFiles/moveit_ros_benchmarks.dir/src/BenchmarkOptions.cpp.o
 │ │ [4/9] Building CXX object CMakeFiles/moveit_ros_benchmarks.dir/src/BenchmarkExecutor.cpp.o
 │ │ FAILED: CMakeFiles/moveit_ros_benchmarks.dir/src/BenchmarkExecutor.cpp.o
 │ │ $BUILD_PREFIX/bin/x86_64-conda-linux-gnu-c++ -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_FILESYSTEM_DYN_ │ │ LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_L │ │ INK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THR │ │ EAD_NO_LIB -DDEFAULT_RMW_IMPLEMENTATION=rmw_fastrtps_cpp -DFMT_SHARED -DTINYXML2_IMPORT -D_FILE_OFFSET_BITS=64 -Dmoveit_ros_benchmarks_EXPORTS -I$SRC_DIR/ros-humble-m │ │ oveit-ros-benchmarks/src/work/include -isystem $PREFIX/include/rclcpp -isystem $PREFIX/include/tf2_eigen -isystem $PREFIX/include/bullet -isystem $PREFIX/include/move │ │ it_butterworth_parameters -isystem $PREFIX/include/eigen3 -isystem $PREFIX/include/pluginlib -isystem $PREFIX/include/ament_index_cpp -isystem $PREFIX/include/libstat │ │ istics_collector -isystem $PREFIX/include/builtin_interfaces -isystem $PREFIX/include/rosidl_runtime_c -isystem $PREFIX/include/rcutils -isystem $PREFIX/include/rosid │ │ l_typesupport_interface -isystem $PREFIX/include/rosidl_runtime_cpp -isystem $PREFIX/include/rosidl_typesupport_fastrtps_cpp -isystem $PREFIX/include/rmw -isystem $PR │ │ EFIX/include/rosidl_typesupport_fastrtps_c -isystem $PREFIX/include/rosidl_typesupport_introspection_c -isystem $PREFIX/include/rosidl_typesupport_introspection_cpp - │ │ isystem $PREFIX/include/rcl -isystem $PREFIX/include/rcl_interfaces -isystem $PREFIX/include/rcl_logging_interface -isystem $PREFIX/include/rcl_yaml_param_parser -isy │ │ stem $PREFIX/include/tracetools -isystem $PREFIX/include/rcpputils -isystem $PREFIX/include/statistics_msgs -isystem $PREFIX/include/rosgraph_msgs -isystem $PREFIX/in │ │ clude/rosidl_typesupport_cpp -isystem $PREFIX/include/rosidl_typesupport_c -isystem $PREFIX/include/geometry_msgs -isystem $PREFIX/include/std_msgs -isystem $PREFIX/i │ │ nclude/tf2 -isystem $PREFIX/include/tf2_ros -isystem $PREFIX/include/message_filters -isystem $PREFIX/include/rclcpp_action -isystem $PREFIX/include/action_msgs -isys │ │ tem $PREFIX/include/unique_identifier_msgs -isystem $PREFIX/include/rcl_action -isystem $PREFIX/include/tf2_msgs -isystem $PREFIX/include/urdf -isystem $PREFIX/includ │ │ e/urdf_parser_plugin -isystem $PREFIX/include/urdfdom_headers -isystem $PREFIX/include/urdfdom -isystem $PREFIX/include/class_loader -isystem $PREFIX/include/visualiz │ │ ation_msgs -isystem $PREFIX/include/sensor_msgs -isystem $PREFIX/include/octomap_msgs -isystem $PREFIX/include/geometric_shapes -isystem $PREFIX/include/resource_retr
 │ │ iever -isystem $PREFIX/include/shape_msgs -isystem $PREFIX/include/tf2_geometry_msgs -isystem $PREFIX/include/angles -isystem $PREFIX/include/moveit_msgs -isystem $PR │ │ EFIX/include/object_recognition_msgs -isystem $PREFIX/include/trajectory_msgs -isystem $PREFIX/include/parameter_traits -isystem $PREFIX/include/rsl -isystem $PREFIX/ │ │ include/rclcpp_lifecycle -isystem $PREFIX/include/rcl_lifecycle -isystem $PREFIX/include/lifecycle_msgs -isystem $PREFIX/include/kdl_parser -fvisibility-inlines-hidde │ │ n -fmessage-length=0 -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem $PREFIX/include -fde │ │ bug-prefix-map=$SRC_DIR=/usr/local/src/conda/ros-humble-moveit-ros-benchmarks-2.5.6 -fdebug-prefix-map=$PREFIX=/usr/local/src/conda-prefix -D__STDC_FORMAT_MACROS=1 -O │ │ 3 -DNDEBUG -std=c++17 -fPIC -fdiagnostics-color=always -Wall -Wextra -Wwrite-strings -Wunreachable-code -Wpointer-arith -Wredundant-decls -Wcast-qual -Wno-maybe-unini │ │ tialized -mfpmath=sse -msse -msse2 -msse3 -mssse3 -MD -MT CMakeFiles/moveit_ros_benchmarks.dir/src/BenchmarkExecutor.cpp.o -MF CMakeFiles/moveit_ros_benchmarks.dir/sr │ │ c/BenchmarkExecutor.cpp.o.d -o CMakeFiles/moveit_ros_benchmarks.dir/src/BenchmarkExecutor.cpp.o -c $SRC_DIR/ros-humble-moveit-ros-benchmarks/src/work/src/BenchmarkExe │ │ cutor.cpp
 │ │ In file included from $SRC_DIR/ros-humble-moveit-ros-benchmarks/src/work/src/BenchmarkExecutor.cpp:47:
 │ │ $PREFIX/include/boost/progress.hpp:23:3: error: #error This header is deprecated and will be removed. (You can define BOOST_TIMER_ENABLE_DEPRECATED to suppress this e │ │ rror.)
 │ │    23 | # error This header is deprecated and will be removed. (You can define BOOST_TIMER_ENABLE_DEPRECATED to suppress this error.)
 │ │       |   ^~~~~
 │ │ In file included from $PREFIX/include/boost/progress.hpp:29:
 │ │ $PREFIX/include/boost/timer.hpp:21:3: error: #error This header is deprecated and will be removed. (You can define BOOST_TIMER_ENABLE_DEPRECATED to suppress this erro │ │ r.)
 │ │    21 | # error This header is deprecated and will be removed. (You can define BOOST_TIMER_ENABLE_DEPRECATED to suppress this error.)
 │ │       |   ^~~~~
 │ │ ninja: build stopped: subcommand failed.
 │ │ × error Script failed with status 1
 │ │ × error Work directory: '/home/straversaro-iit.local/ros-humble/output/bld/rattler-build_ros-humble-moveit-ros-benchmarks_1734645048/work'
 │ │ × error To debug the build, run it manually in the work directory (execute the `./conda_build.sh` or `conda_build.bat` script)
 │ │

[traversaro]

 │ │ -- Build files have been written to: $SRC_DIR/build
 │ │ [1/9] Building CXX object CMakeFiles/moveit_ros_benchmarks.dir/src/BenchmarkOptions.cpp.o
 │ │ [4/9] Building CXX object CMakeFiles/moveit_ros_benchmarks.dir/src/BenchmarkExecutor.cpp.o
 │ │ FAILED: CMakeFiles/moveit_ros_benchmarks.dir/src/BenchmarkExecutor.cpp.o
 │ │ $BUILD_PREFIX/bin/x86_64-conda-linux-gnu-c++ -DBOOST_CHRONO_DYN_LINK -DBOOST_CHRONO_NO_LIB -DBOOST_DATE_TIME_DYN_LINK -DBOOST_DATE_TIME_NO_LIB -DBOOST_FILESYSTEM_DYN_ │ │ LINK -DBOOST_FILESYSTEM_NO_LIB -DBOOST_IOSTREAMS_DYN_LINK -DBOOST_IOSTREAMS_NO_LIB -DBOOST_PROGRAM_OPTIONS_DYN_LINK -DBOOST_PROGRAM_OPTIONS_NO_LIB -DBOOST_REGEX_DYN_L │ │ INK -DBOOST_REGEX_NO_LIB -DBOOST_SERIALIZATION_DYN_LINK -DBOOST_SERIALIZATION_NO_LIB -DBOOST_SYSTEM_DYN_LINK -DBOOST_SYSTEM_NO_LIB -DBOOST_THREAD_DYN_LINK -DBOOST_THR │ │ EAD_NO_LIB -DDEFAULT_RMW_IMPLEMENTATION=rmw_fastrtps_cpp -DFMT_SHARED -DTINYXML2_IMPORT -D_FILE_OFFSET_BITS=64 -Dmoveit_ros_benchmarks_EXPORTS -I$SRC_DIR/ros-humble-m │ │ oveit-ros-benchmarks/src/work/include -isystem $PREFIX/include/rclcpp -isystem $PREFIX/include/tf2_eigen -isystem $PREFIX/include/bullet -isystem $PREFIX/include/move │ │ it_butterworth_parameters -isystem $PREFIX/include/eigen3 -isystem $PREFIX/include/pluginlib -isystem $PREFIX/include/ament_index_cpp -isystem $PREFIX/include/libstat │ │ istics_collector -isystem $PREFIX/include/builtin_interfaces -isystem $PREFIX/include/rosidl_runtime_c -isystem $PREFIX/include/rcutils -isystem $PREFIX/include/rosid │ │ l_typesupport_interface -isystem $PREFIX/include/rosidl_runtime_cpp -isystem $PREFIX/include/rosidl_typesupport_fastrtps_cpp -isystem $PREFIX/include/rmw -isystem $PR │ │ EFIX/include/rosidl_typesupport_fastrtps_c -isystem $PREFIX/include/rosidl_typesupport_introspection_c -isystem $PREFIX/include/rosidl_typesupport_introspection_cpp - │ │ isystem $PREFIX/include/rcl -isystem $PREFIX/include/rcl_interfaces -isystem $PREFIX/include/rcl_logging_interface -isystem $PREFIX/include/rcl_yaml_param_parser -isy │ │ stem $PREFIX/include/tracetools -isystem $PREFIX/include/rcpputils -isystem $PREFIX/include/statistics_msgs -isystem $PREFIX/include/rosgraph_msgs -isystem $PREFIX/in │ │ clude/rosidl_typesupport_cpp -isystem $PREFIX/include/rosidl_typesupport_c -isystem $PREFIX/include/geometry_msgs -isystem $PREFIX/include/std_msgs -isystem $PREFIX/i │ │ nclude/tf2 -isystem $PREFIX/include/tf2_ros -isystem $PREFIX/include/message_filters -isystem $PREFIX/include/rclcpp_action -isystem $PREFIX/include/action_msgs -isys │ │ tem $PREFIX/include/unique_identifier_msgs -isystem $PREFIX/include/rcl_action -isystem $PREFIX/include/tf2_msgs -isystem $PREFIX/include/urdf -isystem $PREFIX/includ │ │ e/urdf_parser_plugin -isystem $PREFIX/include/urdfdom_headers -isystem $PREFIX/include/urdfdom -isystem $PREFIX/include/class_loader -isystem $PREFIX/include/visualiz │ │ ation_msgs -isystem $PREFIX/include/sensor_msgs -isystem $PREFIX/include/octomap_msgs -isystem $PREFIX/include/geometric_shapes -isystem $PREFIX/include/resource_retr
 │ │ iever -isystem $PREFIX/include/shape_msgs -isystem $PREFIX/include/tf2_geometry_msgs -isystem $PREFIX/include/angles -isystem $PREFIX/include/moveit_msgs -isystem $PR │ │ EFIX/include/object_recognition_msgs -isystem $PREFIX/include/trajectory_msgs -isystem $PREFIX/include/parameter_traits -isystem $PREFIX/include/rsl -isystem $PREFIX/ │ │ include/rclcpp_lifecycle -isystem $PREFIX/include/rcl_lifecycle -isystem $PREFIX/include/lifecycle_msgs -isystem $PREFIX/include/kdl_parser -fvisibility-inlines-hidde │ │ n -fmessage-length=0 -march=nocona -mtune=haswell -ftree-vectorize -fPIC -fstack-protector-strong -fno-plt -O2 -ffunction-sections -pipe -isystem $PREFIX/include -fde │ │ bug-prefix-map=$SRC_DIR=/usr/local/src/conda/ros-humble-moveit-ros-benchmarks-2.5.6 -fdebug-prefix-map=$PREFIX=/usr/local/src/conda-prefix -D__STDC_FORMAT_MACROS=1 -O │ │ 3 -DNDEBUG -std=c++17 -fPIC -fdiagnostics-color=always -Wall -Wextra -Wwrite-strings -Wunreachable-code -Wpointer-arith -Wredundant-decls -Wcast-qual -Wno-maybe-unini │ │ tialized -mfpmath=sse -msse -msse2 -msse3 -mssse3 -MD -MT CMakeFiles/moveit_ros_benchmarks.dir/src/BenchmarkExecutor.cpp.o -MF CMakeFiles/moveit_ros_benchmarks.dir/sr │ │ c/BenchmarkExecutor.cpp.o.d -o CMakeFiles/moveit_ros_benchmarks.dir/src/BenchmarkExecutor.cpp.o -c $SRC_DIR/ros-humble-moveit-ros-benchmarks/src/work/src/BenchmarkExe │ │ cutor.cpp
 │ │ In file included from $SRC_DIR/ros-humble-moveit-ros-benchmarks/src/work/src/BenchmarkExecutor.cpp:47:
 │ │ $PREFIX/include/boost/progress.hpp:23:3: error: #error This header is deprecated and will be removed. (You can define BOOST_TIMER_ENABLE_DEPRECATED to suppress this e │ │ rror.)
 │ │    23 | # error This header is deprecated and will be removed. (You can define BOOST_TIMER_ENABLE_DEPRECATED to suppress this error.)
 │ │       |   ^~~~~
 │ │ In file included from $PREFIX/include/boost/progress.hpp:29:
 │ │ $PREFIX/include/boost/timer.hpp:21:3: error: #error This header is deprecated and will be removed. (You can define BOOST_TIMER_ENABLE_DEPRECATED to suppress this erro │ │ r.)
 │ │    21 | # error This header is deprecated and will be removed. (You can define BOOST_TIMER_ENABLE_DEPRECATED to suppress this error.)
 │ │       |   ^~~~~
 │ │ ninja: build stopped: subcommand failed.
 │ │ × error Script failed with status 1
 │ │ × error Work directory: '/home/straversaro-iit.local/ros-humble/output/bld/rattler-build_ros-humble-moveit-ros-benchmarks_1734645048/work'
 │ │ × error To debug the build, run it manually in the work directory (execute the `./conda_build.sh` or `conda_build.bat` script)
 │ │

I can't work on this more today, but I wonder if we need to back port https://github.com/moveit/moveit2/pull/2811/files .

[Tobias-Fischer]

New failure:

2024-12-20T02:48:02.1192801Z  │ │ In file included from /usr/include/python3.12/Python.h:12,
2024-12-20T02:48:02.1194322Z  │ │                  from $SRC_DIR/ros-humble-webots-ros2-driver/src/work/include/webots_ros2_driver/PythonPlugin.hpp:18,
2024-12-20T02:48:02.1195873Z  │ │                  from $SRC_DIR/ros-humble-webots-ros2-driver/src/work/src/WebotsNode.cpp:39:
2024-12-20T02:48:02.1197530Z  │ │ /usr/include/python3.12/pyconfig.h:3:12: fatal error: x86_64-linux-gnu/python3.12/pyconfig.h: No such file or directory
2024-12-20T02:48:02.1205015Z  │ │     3 | #  include <x86_64-linux-gnu/python3.12/pyconfig.h>

This is because of:

2024-12-20T02:47:35.7800525Z  │ │ -- Found Python: /usr/include/python3.12 (found version "3.12.3") found components: Development Development.Module Development.Embed

Note we already have: https://github.com/traversaro/ros-humble/blob/rebuild-christmas-2024-linux-64-rattler-build/patch/ros-humble-webots-ros2-driver.patch

I wonder if $ENV{ROS_DISTRO} is properly set?

[traversaro]

I wonder if $ENV{ROS_DISTRO} is properly set?

In theory that is set in the activation scripts of ros-humble-ros-environment , and that is installed in the host dependencies of the failing package. I will check with conda_build.sh locally to understand why it is failing.

[traversaro]

Great, I could not reproduce this locally.