This is the codebase for chemilang.
Chemilang is a declarational language for constructing advanced Chemical Reaction Networks. Inspired by HDL languages and CRN++, it combines features from both to allow for sequential programs, but also fully utilizing the power of parallel execution.
It is meant to compile to crnsimul compatible source code, and the two projects are developed by the same group.
For instructions on how to use chemilang, see the manual.
The project uses cmake. To compile a project using cmake, the following commands should be used:
cmake .
makeThe dependencies can be found in the dockerfile. For Arch Linux, they can be installed by running
sudo pacman -S clang flex bison boost gnuplot gtest
Language servers require a compile_commands.json file to be present to enable better autocompletion support. To generate it when running cmake, modify your cmake command to be
cmake -DCMAKE_EXPORT_COMPILE_COMMANDS=1
For convenience, you can add alias cmake="cmake -DCMAKE_EXPORT_COMPILE_COMMANDS=1" to your .bashrc.
Github has a CI step implemented that requires that all code is compliant with the .clang-format file in the root of the project directory. You can use the format.sh file to format the code automatically, or use a tool that implements clang-format on save for instance. For vim I can recommend neoformat.