Skip to content

Issues: RTXteam/RTX-KG2

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

193 Open 206 Closed
193 Open 206 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

KG2pre build instance setup script should install jq by default housekeeping verify this fix in next kg2 build
#421 opened Nov 13, 2024 by saramsey
RTX-KG2 needs to ETL the UNII identifiers list caution tricky high priority verify this fix in next kg2 build
#420 opened Nov 13, 2024 by saramsey
2
CTKP Castleman treats edge not returned from KG2.10.1 bug Something isn't working
#419 opened Nov 8, 2024 by amykglen
18
Clinical Trials KP edge predicates are malformed - double 'biolink' prefix - e.g., "biolink:biolink_treats" bug Something isn't working high priority verify this fix in next kg2 build
#416 opened Oct 5, 2024 by amykglen
@saramsey
1
gene -- causes -> phenotype edge from uniprot? question Further information is requested
#415 opened Oct 3, 2024 by amykglen
4
Wrong infores curie used on Clinical Trials KP edges (infores:biothings-multiomics-clinicaltrials) bug Something isn't working high priority verify this fix in next kg2 build
#414 opened Oct 3, 2024 by amykglen
2
ETL Drug Approvals KP into RTX-KG2.10.2pre enhancement New feature or request high priority
#412 opened Sep 9, 2024 by saramsey
@saramsey @axay28
3
Node Normalization of conflation for T1D
#410 opened Sep 4, 2024 by jaredroach
Pull File from S3 Bucket when cURL Fails caution tricky
#409 opened Sep 2, 2024 by ecwood
PathWhiz?
#407 opened Aug 13, 2024 by cbizon
3
KL/AT Updates
#406 opened Aug 8, 2024 by ecwood
Handling Mondo's disease_responds_to edges
#403 opened Jul 30, 2024 by ecwood
drug_regulatory_status_world_wide is not a valid predicate bug Something isn't working
#402 opened Jul 18, 2024 by amykglen
3
Should we ETL "SMILE" information for small molecule compounds, into KG2pre? question Further information is requested
#401 opened Jul 17, 2024 by saramsey
3
Code Cleanup housekeeping
#399 opened Jul 16, 2024 by ecwood
@ecwood
3
Should edge_id's use the core_predicate when there is no qualified_predicate? question Further information is requested sar-look Marks an issue that Steve needs to examine
#397 opened Jul 10, 2024 by ecwood
Subject Qualifiers
#396 opened Jul 10, 2024 by ecwood
infores:nddf-umls is deprecated
#391 opened Jul 2, 2024 by ecwood
Consider Removing Retracted Papers from RTX-KG2 enhancement New feature or request
#386 opened Jun 28, 2024 by ecwood
@ecwood
SemMedDB (Final) Update question Further information is requested
#384 opened Jun 27, 2024 by ecwood
DrugBank Drug Interaction Sentences Seem to Be of a Standard Type
#383 opened Jun 26, 2024 by ecwood
@ecwood
6
Update DrugBank
#382 opened Jun 26, 2024 by ecwood
@ecwood
Biolink v4.2.0 Incompatibilities
#381 opened Jun 26, 2024 by ecwood
@ecwood
5
Need to Upgrade from Python 3.7 high priority
#379 opened Jun 25, 2024 by ecwood
@saramsey
4
incorrect subclass-of edge in KG2.9.0pre
#377 opened May 30, 2024 by saramsey
@saramsey
ProTip! Add no:assignee to see everything that’s not assigned.