Dev ife #64
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Dev ife #64
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ifeoluwaale
commented
Dec 25, 2023
ifeoluwaale
commented
- Added workflow that builds package and runs unit and integ tests when changes are made to any branch.
- Updated pypi_release workflow to only run after tests pass.
* mostly change to readers for RWL files 1. change readers to handle series IDs of different lengths and the potential for negative (B.C.) years 2. removed directory change in __init__ so that default is path where the notebook or script is * Update __init__.py * Update readers.py --------- Co-authored-by: Michele Cosi <[email protected]>
kanchukaitis
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Dec 28, 2023
CosiMichele
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Jan 4, 2024
* Slight update to __init__.py with version number plus test of new versioning branch (#58) * Update pyproject.toml * Update __init__.py * Update update.txt * Small changes from dev-kja (#59) * Update pyproject.toml * Update __init__.py * new testing notebook, new notebook directory, update __init__.py again 1. Created a notebooks folder to hold example and testing notebooks 2. Create a notebook to test on West Walker River (the entirely floating chronology with some weird series codes) 3. Removed the os.chdir in __init__.py so it doesn't leave the working directory upon importing dplPy * various 1. removed line in xdate.py that was printing all the ranges - OK for debugging but not necessary for operational use? 2. removed update.txt 3. continued to work on WWR notebook examples * Update floating_chronology_example.ipynb * Updates to README to reflect current stage of project including 2 new assets (#60) * Update pyproject.toml * Update __init__.py * new testing notebook, new notebook directory, update __init__.py again 1. Created a notebooks folder to hold example and testing notebooks 2. Create a notebook to test on West Walker River (the entirely floating chronology with some weird series codes) 3. Removed the os.chdir in __init__.py so it doesn't leave the working directory upon importing dplPy * various 1. removed line in xdate.py that was printing all the ranges - OK for debugging but not necessary for operational use? 2. removed update.txt 3. continued to work on WWR notebook examples * Update floating_chronology_example.ipynb * update readme and assets * README update (#61) * Update pyproject.toml * Update __init__.py * new testing notebook, new notebook directory, update __init__.py again 1. Created a notebooks folder to hold example and testing notebooks 2. Create a notebook to test on West Walker River (the entirely floating chronology with some weird series codes) 3. Removed the os.chdir in __init__.py so it doesn't leave the working directory upon importing dplPy * various 1. removed line in xdate.py that was printing all the ranges - OK for debugging but not necessary for operational use? 2. removed update.txt 3. continued to work on WWR notebook examples * Update floating_chronology_example.ipynb * update readme and assets * Update README.md * primarily a change to detrend plus some organization and clean up (#62) * Update pyproject.toml * Update __init__.py * new testing notebook, new notebook directory, update __init__.py again 1. Created a notebooks folder to hold example and testing notebooks 2. Create a notebook to test on West Walker River (the entirely floating chronology with some weird series codes) 3. Removed the os.chdir in __init__.py so it doesn't leave the working directory upon importing dplPy * various 1. removed line in xdate.py that was printing all the ranges - OK for debugging but not necessary for operational use? 2. removed update.txt 3. continued to work on WWR notebook examples * Update floating_chronology_example.ipynb * update readme and assets * Update README.md * modify detrend to pass correct period to spline plus some organization * Update README.md * Update README.md (#63) * Dev ife (#64) * xdate works for overall series correlation * Added code for creating bins and dividing series into segments * Cleaning up and commenting related to xdate * series_corr works but is inefficient * WIP changes * Added comments, updated working jupyter notebook * Changes since start of fall semester * variance stabiliization produces accurate values * Unit tests for readers, summary, stats and tbrm * Added unit tests for detrend and chron * Added tests for chron_stabilized, series_corr and writers * Fixed merge conflicts * v0.1 release * Fixing the rwl reader and writer problem * Create pypi_release.yml * push for workflow (#54) * Update pypi_release.yml * Update pyproject.toml * xdate works for overall series correlation * series_corr works but is inefficient * WIP changes * Added comments, updated working jupyter notebook * Changes since start of fall semester * variance stabiliization produces accurate values * Unit tests for readers, summary, stats and tbrm * Added tests for chron_stabilized, series_corr and writers * v0.1 release * Attempt at fixing dependency issues * Create pypi_release.yml * Update pypi_release.yml * Modification to readers plus small changes to dplpy and pyproject (#55) * mostly change to readers for RWL files 1. change readers to handle series IDs of different lengths and the potential for negative (B.C.) years 2. removed directory change in __init__ so that default is path where the notebook or script is * Update __init__.py * Update readers.py --------- Co-authored-by: Michele Cosi <[email protected]> * Revert "Modification to readers plus small changes to dplpy and pyproject (#55)" This reverts commit 68b9aa1. * Update pyproject.toml (#57) * Update update.txt * Github workflow for unit testing * Added github workflow to run integration tests * Fixed issue that caused integs to fail in previous commit * Changed write function in writers.py to writers * Fixed deprecation warning for \d regex expression --------- Co-authored-by: Ifeoluwa Ale <[email protected]> Co-authored-by: cosimichele <[email protected]> Co-authored-by: Ifeoluwa Ale <[email protected]> Co-authored-by: Michele Cosi <[email protected]> Co-authored-by: Kevin Anchukaitis <[email protected]> * updated .py modules with additional help descriptions, updated copywrite year * updated help docs to match numpy documentation format * updated dplpy.readme() * Dev ife (#65) * xdate works for overall series correlation * Added code for creating bins and dividing series into segments * Cleaning up and commenting related to xdate * series_corr works but is inefficient * WIP changes * Added comments, updated working jupyter notebook * Changes since start of fall semester * variance stabiliization produces accurate values * Unit tests for readers, summary, stats and tbrm * Added unit tests for detrend and chron * Added tests for chron_stabilized, series_corr and writers * Fixed merge conflicts * v0.1 release * Fixing the rwl reader and writer problem * Create pypi_release.yml * push for workflow (#54) * Update pypi_release.yml * Update pyproject.toml * xdate works for overall series correlation * series_corr works but is inefficient * WIP changes * Added comments, updated working jupyter notebook * Changes since start of fall semester * variance stabiliization produces accurate values * Unit tests for readers, summary, stats and tbrm * Added tests for chron_stabilized, series_corr and writers * v0.1 release * Attempt at fixing dependency issues * Create pypi_release.yml * Update pypi_release.yml * Modification to readers plus small changes to dplpy and pyproject (#55) * mostly change to readers for RWL files 1. change readers to handle series IDs of different lengths and the potential for negative (B.C.) years 2. removed directory change in __init__ so that default is path where the notebook or script is * Update __init__.py * Update readers.py --------- Co-authored-by: Michele Cosi <[email protected]> * Revert "Modification to readers plus small changes to dplpy and pyproject (#55)" This reverts commit 68b9aa1. * Update pyproject.toml (#57) * Update update.txt * Github workflow for unit testing * Added github workflow to run integration tests * Fixed issue that caused integs to fail in previous commit * Changed write function in writers.py to writers * Fixed deprecation warning for \d regex expression * Fix for PerformanceWarning due to fragmented dataframe * Fix for xdate_plot bugs --------- Co-authored-by: Ifeoluwa Ale <[email protected]> Co-authored-by: cosimichele <[email protected]> Co-authored-by: Ifeoluwa Ale <[email protected]> Co-authored-by: Michele Cosi <[email protected]> Co-authored-by: Kevin Anchukaitis <[email protected]> * Updated developer instructions (#67) * Updates for release of 0.1.2 (#68) * Updated developer instructions * Changes for release of 0.1.2 --------- Co-authored-by: Kevin Anchukaitis <[email protected]> Co-authored-by: Michele Cosi <[email protected]> Co-authored-by: Ifeoluwa Ale <[email protected]> Co-authored-by: cosimichele <[email protected]> Co-authored-by: Ifeoluwa Ale <[email protected]> Co-authored-by: Tyson Lee Swetnam <[email protected]>
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