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ci: version bump to 0.7.0 #89

Merged
merged 60 commits into from
Aug 14, 2024
Merged

ci: version bump to 0.7.0 #89

merged 60 commits into from
Aug 14, 2024

Commits on May 26, 2024

  1. fix: optomize dataloading for ambient profile

    @CaibinSh
    CaibinSh committed May 26, 2024
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  2. fix: optomize dataloading for ambient profile

    @CaibinSh
    CaibinSh committed May 26, 2024
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  3. docs: update installation

    @CaibinSh
    CaibinSh committed May 26, 2024
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  4. feat: add functionality for batch ambient removal

    @CaibinSh
    CaibinSh committed May 26, 2024
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  5. feat: add functionality for batch ambient removal

    @CaibinSh
    CaibinSh committed May 26, 2024
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  6. fix: fix a bug and refactor dataloading

    @CaibinSh
    CaibinSh committed May 26, 2024
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  7. fix: fix a bug

    @CaibinSh
    CaibinSh committed May 26, 2024
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  8. fix: fix a bug

    @CaibinSh
    CaibinSh committed May 26, 2024
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  9. fix: fix a bug

    @CaibinSh
    CaibinSh committed May 26, 2024
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  10. fix: fix a bug

    @CaibinSh
    CaibinSh committed May 26, 2024
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Commits on May 28, 2024

  1. refactor: refactor scar dataloader

    @CaibinSh
    CaibinSh committed May 28, 2024
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  2. refactor: refactor codes for better GPU usage

    @CaibinSh
    CaibinSh committed May 28, 2024
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  3. refactor: refactor codes for better GPU usage

    @CaibinSh
    CaibinSh committed May 28, 2024
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Commits on Jul 24, 2024

  1. refactor: Refactor functions for compatibility with scipy 1.14

    @CaibinSh
    CaibinSh committed Jul 24, 2024
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Commits on Jul 25, 2024

  1. refactor: load entire data to GPU

    @CaibinSh
    CaibinSh committed Jul 25, 2024
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Commits on Jul 27, 2024

  1. refactor(scar): refactor dataloading to improve efficiency

    @CaibinSh
    CaibinSh committed Jul 27, 2024
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  2. refactor(scar): refactor dataloading to improve efficiency

    @CaibinSh
    CaibinSh committed Jul 27, 2024
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  3. refactor(scar): refactor dataloading to improve efficiency

    @CaibinSh
    CaibinSh committed Jul 27, 2024
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  4. refactor(scar): refactor dataloading to improve efficiency

    @CaibinSh
    CaibinSh committed Jul 27, 2024
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  5. feature(scar): introduce caching functionality

    @CaibinSh
    CaibinSh committed Jul 27, 2024
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Commits on Jul 28, 2024

  1. doc(docs): update python version for readthedocs

    @CaibinSh
    CaibinSh committed Jul 28, 2024
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  2. doc(docs): update sphinx-gallery version for readthedocs

    @CaibinSh
    CaibinSh committed Jul 28, 2024
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  3. refactor(scar): delete unneccessary codes

    @CaibinSh
    CaibinSh committed Jul 28, 2024
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Commits on Jul 29, 2024

  1. refactor(scar): refactor scar to allow efficient usage of GPU

    @CaibinSh
    CaibinSh committed Jul 29, 2024
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  2. refactor(scar): refactor scar to allow efficient usage of GPU

    @CaibinSh
    CaibinSh committed Jul 29, 2024
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  3. refactor(scar): refactor scar to allow efficient usage of GPU

    @CaibinSh
    CaibinSh committed Jul 29, 2024
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  4. refactor(scar): refactor scar to allow efficient usage of GPU

    @CaibinSh
    CaibinSh committed Jul 29, 2024
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Commits on Aug 7, 2024

  1. refactor(scar): not output native frequencies by default

    @CaibinSh
    CaibinSh committed Aug 7, 2024
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Commits on Aug 8, 2024

  1. refactor(scar): refactor dataloader

    @CaibinSh
    CaibinSh committed Aug 8, 2024
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  2. refactor(scar): remove redundant codes

    @CaibinSh
    CaibinSh committed Aug 8, 2024
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  3. refactor(scar): optimize dataloading

    @CaibinSh
    CaibinSh committed Aug 8, 2024
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  4. refactor(vae): refactor stochastic rounding for performance

    @CaibinSh
    CaibinSh committed Aug 8, 2024
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Commits on Aug 9, 2024

  1. chore: rewrite device log information

    @CaibinSh
    CaibinSh committed Aug 9, 2024
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Commits on Aug 10, 2024

  1. docs(scar): correct docs for scar

    @CaibinSh
    CaibinSh committed Aug 10, 2024
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  2. docs(tutorials): update tutorial notebooks

    EC2 Default User committed Aug 10, 2024
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  3. docs(scar): refactor docs

    @CaibinSh
    CaibinSh committed Aug 10, 2024
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  4. Merge branch 'develop' of https://github.com/Novartis/scar into develop

    @CaibinSh
    CaibinSh committed Aug 10, 2024
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Commits on Aug 11, 2024

  1. docs(scar): add docs for cache_capacity parameter

    @CaibinSh
    CaibinSh committed Aug 11, 2024
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  2. refactor(main): refactor command line tool

    @CaibinSh
    CaibinSh committed Aug 11, 2024
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  3. refator(scar): refactor scar to automate calculation of ambient profi… 

    …le in the case of no ambient profile provided
    @CaibinSh
    CaibinSh committed Aug 11, 2024
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  4. fix(main): fix a bug

    @CaibinSh
    CaibinSh committed Aug 11, 2024
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  5. fix(main): fix a bug

    @CaibinSh
    CaibinSh committed Aug 11, 2024
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Commits on Aug 12, 2024

  1. Merge branch 'main' into develop

    @CaibinSh
    CaibinSh committed Aug 12, 2024
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  2. fix(test): lower down sample size for test

    @CaibinSh
    CaibinSh committed Aug 12, 2024
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  3. docs(scar): update version in doc

    @CaibinSh
    CaibinSh committed Aug 12, 2024
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Commits on Aug 14, 2024

  1. docs(tutorial): update notebooks

    @CaibinSh
    CaibinSh committed Aug 14, 2024
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  2. docs(tutorial): add a tutorial for batch denoising

    @CaibinSh
    CaibinSh committed Aug 14, 2024
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  3. refactor(docs): reset semantic_release to main branch

    @CaibinSh
    CaibinSh committed Aug 14, 2024
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  4. docs(tutorial): update hyperlink

    @CaibinSh
    CaibinSh committed Aug 14, 2024
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  5. fix(workflow): update semantic release

    @CaibinSh
    CaibinSh committed Aug 14, 2024
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  6. fix(workflow): update semantic release

    @CaibinSh
    CaibinSh committed Aug 14, 2024
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  7. fix(workflow): update semantic release

    @CaibinSh
    CaibinSh committed Aug 14, 2024
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  8. fix(workflow): update semantic release

    @CaibinSh
    CaibinSh committed Aug 14, 2024
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  9. Merge branch 'main' into develop

    @CaibinSh
    CaibinSh authored Aug 14, 2024
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  10. chore: change semantic release branch

    @CaibinSh
    CaibinSh committed Aug 14, 2024
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  11. Merge branch 'develop' of https://github.com/Novartis/scar into develop

    @CaibinSh
    CaibinSh committed Aug 14, 2024
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  12. chore: change semantic release branch

    @CaibinSh
    CaibinSh committed Aug 14, 2024
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  13. chore: change semantic release branch

    @CaibinSh
    CaibinSh committed Aug 14, 2024
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  14. chore: change semantic release branch

    @CaibinSh
    CaibinSh committed Aug 14, 2024
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  15. Merge branch 'main' into develop

    @CaibinSh
    CaibinSh authored Aug 14, 2024
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