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Run DANDI read tests #230

Run DANDI read tests

Run DANDI read tests #230

name: Run DANDI read tests
on:
schedule:
- cron: '0 6 * * *' # once per day at 1am ET
workflow_dispatch:
jobs:
run-tests:
runs-on: ubuntu-latest
defaults:
run:
shell: bash -l {0} # necessary for conda
steps:
- name: Cancel non-latest runs
uses: styfle/[email protected]
with:
all_but_latest: true
access_token: ${{ github.token }}
- uses: actions/checkout@v3
with:
submodules: 'recursive'
fetch-depth: 0 # tags are required for versioneer to determine the version
- name: Set up Conda
uses: conda-incubator/setup-miniconda@v2
with:
auto-update-conda: true
activate-environment: ros3
environment-file: environment-ros3.yml
python-version: "3.11"
channels: conda-forge
auto-activate-base: false
- name: Install run dependencies
run: |
python -m pip install dandi pytest
python -m pip uninstall -y pynwb # uninstall pynwb
python -m pip install -e .
python -m pip list
- name: Conda reporting
run: |
conda info
conda config --show-sources
conda list --show-channel-urls
- name: Run DANDI read tests
run: |
python tests/read_dandi/test_read_dandi.py