Refactoring of the marine B-matrix job #2749
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| Original file line number | Diff line number | Diff line change |
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| @@ -0,0 +1,66 @@ | ||
| #!/bin/bash | ||
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| source "${HOMEgfs}/ush/preamble.sh" | ||
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| if (( 10#${ENSMEM:-0} > 0 )); then | ||
| export DATAjob="${DATAROOT}/${RUN}marinebmat.${PDY:-}${cyc}" | ||
| export DATA="${DATAjob}/${jobid}" | ||
| # Create the directory to hold ensemble perturbations | ||
| export DATAenspert="${DATAjob}/enspert" | ||
| if [[ ! -d "${DATAenspert}" ]]; then mkdir -p "${DATAenspert}"; fi | ||
| fi | ||
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| # source config.base, config.ocnanal and config.marinebmat | ||
| # and pass marinebmat to ${machine}.env | ||
| source "${HOMEgfs}/ush/jjob_header.sh" -e "marinebmat" -c "base ocnanal marinebmat" | ||
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| ############################################## | ||
| # Set variables used in the script | ||
| ############################################## | ||
| # shellcheck disable=SC2153 | ||
| GDATE=$(date --utc +%Y%m%d%H -d "${PDY} ${cyc} - ${assim_freq} hours") | ||
| gPDY=${GDATE:0:8} | ||
| gcyc=${GDATE:8:2} | ||
| export GDUMP="gdas" | ||
| export GDUMP_ENS="enkf${GDUMP}" | ||
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| ############################################## | ||
| # Begin JOB SPECIFIC work | ||
| ############################################## | ||
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| # Generate COM variables from templates | ||
| RUN=${GDUMP} YMD=${gPDY} HH=${gcyc} declare_from_tmpl -rx \ | ||
| COMIN_OCEAN_HISTORY_PREV:COM_OCEAN_HISTORY_TMPL \ | ||
| COMIN_ICE_HISTORY_PREV:COM_ICE_HISTORY_TMPL | ||
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| RUN=${GDUMP_ENS} YMD=${gPDY} HH=${gcyc} declare_from_tmpl -rx \ | ||
| COMIN_OCEAN_HISTORY_ENS_PREV:COM_OCEAN_HISTORY_TMPL \ | ||
| COMIN_ICE_HISTORY_ENS_PREV:COM_ICE_HISTORY_TMPL | ||
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| YMD=${PDY} HH=${cyc} declare_from_tmpl -rx \ | ||
| COMOUT_OCEAN_BMATRIX:COM_OCEAN_BMATRIX_TMPL \ | ||
| COMOUT_ICE_BMATRIX:COM_ICE_BMATRIX_TMPL | ||
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| mkdir -p "${COMOUT_OCEAN_BMATRIX}" | ||
| mkdir -p "${COMOUT_ICE_BMATRIX}" | ||
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| ############################################################### | ||
| # Run relevant script | ||
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| EXSCRIPT=${GDASMARINEBMATRUNPY:-${SCRgfs}/exglobal_marinebmat.py} | ||
| ${EXSCRIPT} | ||
| status=$? | ||
| [[ ${status} -ne 0 ]] && exit "${status}" | ||
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| ############################################## | ||
| # End JOB SPECIFIC work | ||
| ############################################## | ||
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| ############################################## | ||
| # Final processing | ||
| ############################################## | ||
| if [[ -e "${pgmout}" ]] ; then | ||
| cat "${pgmout}" | ||
| fi | ||
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| exit 0 | ||
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Does this work?
FIXgfsis not available at the setup level. It is available in the jobs. This should be moved to the config files.There was a problem hiding this comment.
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Just tested again, it does work.
{{ FIXgfs }}/gdas/soca/1440x1080x75/socabecomes${ FIXgfs}/gdas/soca/1440x1080x75/socain the config under exp dir.I want to keep the option exposed in the yaml file, since that fix dir is still fluctuating ...