NOAA-EMC · WalterKolczynski-NOAA · Dec 4, 2023 · Nov 27, 2023 · Nov 27, 2023 · Nov 27, 2023
diff --git a/.gitignore b/.gitignore
@@ -30,11 +30,11 @@ fix/chem
 fix/cice
 fix/cpl
 fix/datm
-fix/gdas
 fix/gldas
 fix/gsi
 fix/lut
 fix/mom6
+fix/mon
 fix/orog
 fix/reg2grb2
 fix/sfc_climo

diff --git a/fix/product/gfs_minmon_cost.txt b/fix/product/gfs_minmon_cost.txt
diff --git a/fix/product/gfs_minmon_gnorm.txt b/fix/product/gfs_minmon_gnorm.txt
diff --git a/jobs/JGDAS_ATMOS_VERFOZN b/jobs/JGDAS_ATMOS_VERFOZN
@@ -15,27 +15,17 @@ export HOMEgfs_ozn=${HOMEgfs:-${NWROOT}/gfs.${gfs_ver}}
 export HOMEgdas_ozn=${HOMEgfs_ozn:-${NWROOT}/gfs.${gfs_ver}}
 export PARMgdas_ozn=${PARMgfs_ozn:-${HOMEgfs_ozn}/parm/mon}
 export SCRgdas_ozn=${SCRgfs_ozn:-${HOMEgfs_ozn}/scripts}
-export FIXgdas_ozn=${FIXgfs_ozn:-${HOMEgfs_ozn}/fix/gdas}
+export FIXgdas_ozn=${FIXgfs_ozn:-${HOMEgfs_ozn}/fix/mon}
 
 export HOMEoznmon=${HOMEoznmon:-${HOMEgfs_ozn}}
 export EXECoznmon=${EXECoznmon:-${HOMEoznmon}/exec}
 export FIXoznmon=${FIXoznmon:-${HOMEoznmon}/fix}
 export USHoznmon=${USHoznmon:-${HOMEoznmon}/ush}
 
-
-#-----------------------------------
-# source the parm file
-#
-.  ${PARMgdas_ozn}/gdas_oznmon.parm
-
-
 #############################################
 #  determine PDY and cyc for previous cycle
 #############################################
-
 pdate=$(${NDATE} -6 ${PDY}${cyc})
-echo "pdate = ${pdate}"
-
 export P_PDY=${pdate:0:8}
 export p_cyc=${pdate:8:2}
 
@@ -49,20 +39,27 @@ export TANKverf_ozn=${TANKverf_ozn:-${COM_ATMOS_OZNMON}}
 
 if [[ ! -d ${TANKverf_ozn} ]]; then mkdir -p -m 775 ${TANKverf_ozn} ; fi
 
+#-----------------------------------
+# Other variables
+#
+export OZN_AREA=${OZN_AREA:-glb}
+export oznstat=${oznstat:-${COM_ATMOS_ANALYSIS}/gdas.t${cyc}z.oznstat}
+export SATYPE_FILE=${SATYPE_FILE:-${FIXgdas_ozn}/gdas_oznmon_satype.txt}
+export PDATE=${PDY}${cyc}
+export DO_DATA_RPT=${DO_DATA_RPT:-1}
+
+#-----------------------------------
+# source the parm file
+#
+.  ${PARMgdas_ozn}/gdas_oznmon.parm
+
 #---------------------------------------
-#  set up validation file
+# Set up validation file
 #
 if [[ ${VALIDATE_DATA} -eq 1 ]]; then
    export ozn_val_file=${ozn_val_file:-${FIXgdas_ozn}/gdas_oznmon_base.tar}
 fi
 
-#---------------------------------------
-# Set necessary environment variables
-#
-export OZN_AREA=${OZN_AREA:-glb}
-export oznstat=${oznstat:-${COM_ATMOS_ANALYSIS}/gdas.t${cyc}z.oznstat}
-
-
 #-------------------------------------------------------
 # Execute the script.
 #

diff --git a/jobs/JGDAS_ATMOS_VERFRAD b/jobs/JGDAS_ATMOS_VERFRAD
@@ -6,40 +6,34 @@
 source "${HOMEgfs}/ush/preamble.sh"
 source "${HOMEgfs}/ush/jjob_header.sh" -e "verfrad" -c "base verfrad"
 
-export COMPONENT="atmos"
-
 export RADMON_SUFFIX=${RADMON_SUFFIX:-${RUN}}
 export CYCLE_INTERVAL=${CYCLE_INTERVAL:-6}
+export VERBOSE=${VERBOSE:-YES}
 
 ##############################################
 # Specify Execution Areas
 ##############################################
 export HOMEgfs=${HOMEgfs:-${NWROOT}/gfs.${gfs_ver}}
 export SCRgfs=${SCRgfs:-${HOMEgfs}/scripts}
 
-export FIXgdas=${FIXgdas:-${HOMEgfs}/fix/gdas}
+export FIXgdas=${FIXgdas:-${HOMEgfs}/fix/mon}
 export PARMmon=${PARMmon:-${HOMEgfs}/parm/mon}
 
 export HOMEradmon=${HOMEradmon:-${HOMEgfs}}
 export EXECradmon=${EXECradmon:-${HOMEradmon}/exec}
 export FIXradmon=${FIXradmon:-${FIXgfs}}
 export USHradmon=${USHradmon:-${HOMEradmon}/ush}
 
-
 ###################################
 # source the parm file
 ###################################
 parm_file=${parm_file:-${PARMmon}/da_mon.parm}
 .  ${parm_file}
 
-
 #############################################
 #  determine PDY and cyc for previous cycle
 #############################################
-
 pdate=$(${NDATE} -6 ${PDY}${cyc})
-echo "pdate = ${pdate}"
-
 export P_PDY=${pdate:0:8}
 export p_cyc=${pdate:8:2}
 
@@ -57,31 +51,26 @@ export TANKverf_radM1=${TANKverf_radM1:-${COM_ATMOS_RADMON_PREV}}
 if [[ ! -d ${TANKverf_rad} ]]; then mkdir -p -m 775 ${TANKverf_rad} ; fi
 if [[ ! -d ${TANKverf_radM1} ]]; then mkdir -p -m 775 ${TANKverf_radM1} ; fi
 
-########################################
-# Set necessary environment variables
-########################################
-export RAD_AREA=${RAD_AREA:-glb}
-
+#############################################
+#  Filenames
 export biascr=${biascr:-${COM_ATMOS_ANALYSIS}/gdas.t${cyc}z.abias}
 export radstat=${radstat:-${COM_ATMOS_ANALYSIS}/gdas.t${cyc}z.radstat}
+export satype_file=${satype_file:-${FIXgdas}/gdas_radmon_satype.txt}
 
-echo " "
-echo "JOB HAS STARTED"
-echo " "
-
+#  Other variables
+export RAD_AREA=${RAD_AREA:-glb}
+export MAKE_CTL=${MAKE_CTL:-1}
+export MAKE_DATA=${MAKE_DATA:-1}
+export USE_ANL=${USE_ANL:-1}
+export PDATE=${PDY}${cyc}
+export DO_DIAG_RPT=${DO_DIAG_RPT:-1}
+export DO_DATA_RPT=${DO_DATA_RPT:-1}
 
 ########################################################
 # Execute the script.
 ${RADMONSH:-${SCRgfs}/exgdas_atmos_verfrad.sh} ${PDY} ${cyc}
 err=$?
-
-if [[ ${err} -ne 0 ]] ; then
-   exit ${err}
-else
-   echo " "
-   echo "JOB HAS COMPLETED NORMALLY"
-   echo " "
-fi
+[[ ${err} -ne 0 ]] && exit ${err}
 
 ################################
 # Remove the Working Directory

diff --git a/jobs/JGFS_ATMOS_VMINMON b/jobs/JGFS_ATMOS_VMINMON
diff --git a/jobs/JGDAS_ATMOS_VMINMON → jobs/JGLOBAL_ATMOS_VMINMON b/jobs/JGDAS_ATMOS_VMINMON → jobs/JGLOBAL_ATMOS_VMINMON
@@ -1,42 +1,25 @@
 #! /usr/bin/env bash
 
 ###########################################################
-# GDAS Minimization Monitor (MinMon) job
+# Global Minimization Monitor (MinMon) job
 ###########################################################
 source "${HOMEgfs}/ush/preamble.sh"
 source "${HOMEgfs}/ush/jjob_header.sh" -e "vminmon" -c "base vminmon"
 
-###########################################################
-# obtain unique process id (pid) and make temp directories
-###########################################################
-export MINMON_SUFFIX=${MINMON_SUFFIX:-${NET}}
-export m_job=${m_job:-${MINMON_SUFFIX}_mmDE}
-
-
 ##############################################
 # Specify Package Areas
 ##############################################
-export HOMEgfs=${HOMEgfs:-${NWROOT}/gfs.${gfs_ver}}
+export M_FIX=${M_FIX:-${HOMEgfs}/fix/mon}
 export SCRgfs=${SCRgfs:-${HOMEgfs}/scripts}
-
-export M_FIXgdas=${M_FIXgdas:-${HOMEgfs}/fix/gdas}
-
-export HOMEminmon=${HOMEminmon:-${HOMEgfs}}
-export EXECminmon=${EXECminmon:-${HOMEminmon}/exec}
-export USHminmon=${USHminmon:-${HOMEminmon}/ush}
-
+export USHminmon=${USHminmon:-${HOMEgfs}/ush}
 
 #############################################
-#  determine PDY and cyc for previous cycle
+# Determine PDY and cyc for previous cycle
 #############################################
-
 pdate=$(${NDATE} -6 ${PDY}${cyc})
-echo "pdate = ${pdate}"
-
 export P_PDY=${pdate:0:8}
 export p_cyc=${pdate:8:2}
 
-
 #############################################
 # TANKverf - WHERE OUTPUT DATA WILL RESIDE
 #############################################
@@ -50,17 +33,22 @@ export M_TANKverfM1=${M_TANKverfM1:-${COM_ATMOS_MINMON_PREV}}
 if [[ ! -d ${M_TANKverf} ]]; then mkdir -p -m 775 ${M_TANKverf} ; fi
 if [[ ! -d ${M_TANKverfM1} ]]; then mkdir -p -m 775 ${M_TANKverfM1} ; fi
 
-
 ########################################
 # Set necessary environment variables
 ########################################
+export MINMON_SUFFIX=${MINMON_SUFFIX:-${NET}}
 export CYCLE_INTERVAL=6
-export gsistat=${gsistat:-${COM_ATMOS_ANALYSIS}/gdas.t${cyc}z.gsistat}
 
+########################################
+#  Filenames
+########################################
+export gsistat=${gsistat:-${COM_ATMOS_ANALYSIS}/${RUN}.t${cyc}z.gsistat}
+export mm_gnormfile=${gnormfile:-${M_FIX}/${RUN}_minmon_gnorm.txt}
+export mm_costfile=${costfile:-${M_FIX}/${RUN}_minmon_cost.txt}
 
 ########################################################
 # Execute the script.
-${GMONSH:-${SCRgfs}/exgdas_atmos_vminmon.sh} ${PDY} ${cyc}
+"${GMONSH:-${SCRgfs}/exglobal_atmos_vminmon.sh}"
 err=$?
 [[ ${err} -ne 0 ]] && exit ${err}
 

diff --git a/jobs/rocoto/vminmon.sh b/jobs/rocoto/vminmon.sh
@@ -16,7 +16,7 @@ export jobid="${job}.$$"
 echo
 echo "=============== START TO RUN MINMON ==============="
 
-"${HOMEgfs}/jobs/J${RUN^^}_ATMOS_VMINMON"
+"${HOMEgfs}/jobs/JGLOBAL_ATMOS_VMINMON"
 status=$?
 
 exit "${status}"
diff --git a/scripts/exgdas_atmos_verfozn.sh b/scripts/exgdas_atmos_verfozn.sh
@@ -3,48 +3,14 @@
 source "$HOMEgfs/ush/preamble.sh"
 
 ################################################################################
-# exgdas_vrfyozn.sh
+# exgdas_atmos_verfozn.sh
 #
 # This script runs the data extract/validation portion of the Ozone Monitor
 # (OznMon) DA package.
 #
 ################################################################################
 err=0
 
-#-------------------------------------------------------------------------------
-#  Set environment
-#
-export NET=${NET:-gfs}
-export RUN=${RUN:-gdas}
-export envir=${envir:-prod}
-
-#  Other variables
-export SATYPE_FILE=${SATYPE_FILE:-$FIXgdas_ozn/gdas_oznmon_satype.txt}
-export PDATE=${PDY}${cyc}
-export DO_DATA_RPT=${DO_DATA_RPT:-1}
-export NCP=${NCP:-/bin/cp}
-
-
-#-----------------------------------------------------------------
-# ensure work and TANK dirs exist, verify oznstat is available
-#
-export OZN_WORK_DIR=${OZN_WORK_DIR:-$(pwd)}
-
-if [[ ! -d ${OZN_WORK_DIR} ]]; then
-   mkdir $OZN_WORK_DIR
-fi
-cd $OZN_WORK_DIR
-
-if [[ ! -d ${TANKverf_ozn} ]]; then
-   mkdir -p $TANKverf_ozn
-fi
-
-if [[ -s ${oznstat} ]]; then
-   echo ${oznstat} is available
-fi
-
-
-
 data_available=0
 
 if [[ -s ${oznstat} ]]; then