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Update module loads to intel/2022 for jobs running gsi.x and enkf.x #1882

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merged 12 commits into from
Sep 29, 2023
Merged

Update module loads to intel/2022 for jobs running gsi.x and enkf.x #1882

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2a1603b
add scripting to load gsi_enkf modules in anal.sh, eobs.sh, and eupd.…
RussTreadon-NOAA Sep 19, 2023
4f25f86
refactor module loads in anal.sh, eobs.sh, and eupd.sh to account for…
RussTreadon-NOAA Sep 20, 2023
c3982ef
Merge branch 'NOAA-EMC:develop' into feature/intel2022_updates
RussTreadon-NOAA Sep 21, 2023
c5606ec
Merge branch 'NOAA-EMC:develop' into feature/intel2022_updates
RussTreadon-NOAA Sep 25, 2023
2d4d020
fix indentation innrocoto jobs (#1863)
RussTreadon-NOAA Sep 25, 2023
a86b95a
update GSI hash to bring in intel/2022 bug fixes and safeguards (#1863)
RussTreadon-NOAA Sep 26, 2023
84f3825
add workflow to PYTHONPATH on Orion (#1863)
RussTreadon-NOAA Sep 26, 2023
d37d3d2
replace PYTHONPATH for Orion with regional_workflow (#1863)
RussTreadon-NOAA Sep 26, 2023
a1cabe0
Merge branch 'NOAA-EMC:develop' into feature/intel2022_updates
RussTreadon-NOAA Sep 27, 2023
95b705f
replace regional_workflow with regional_workflow_cmaq (#1863)
RussTreadon-NOAA Sep 28, 2023
33846f5
replace set -u with set_strict (#1863)
RussTreadon-NOAA Sep 29, 2023
b00f0a7
Merge branch 'NOAA-EMC:develop' into feature/intel2022_updates
RussTreadon-NOAA Sep 29, 2023
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33 changes: 30 additions & 3 deletions jobs/rocoto/anal.sh
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Original file line number Diff line number Diff line change
Expand Up @@ -4,9 +4,36 @@ source "${HOMEgfs}/ush/preamble.sh"

###############################################################
# Source FV3GFS workflow modules
. ${HOMEgfs}/ush/load_fv3gfs_modules.sh
status=$?
[[ ${status} -ne 0 ]] && exit ${status}
#. ${HOMEgfs}/ush/load_fv3gfs_modules.sh
#status=$?
#[[ ${status} -ne 0 ]] && exit ${status}

# TODO: clean this up
#Source appropriate modulefiles based on machine

source "${HOMEgfs}/ush/detect_machine.sh"
if [[ "${MACHINE_ID}" = "wcoss2" ]]; then
# Source FV3GFS workflow modules
. "${HOMEgfs}"/ush/load_fv3gfs_modules.sh
status=$?
[[ ${status} -ne 0 ]] && exit "${status}"
else
# Append compiler (only on machines that have multiple compilers)
COMPILER=${COMPILER:-"intel"}
if [[ "${MACHINE_ID}" = "hera" ]] || [[ "${MACHINE_ID}" = "cheyenne" ]]; then
MACHINE_ID=${MACHINE_ID}.${COMPILER}
fi

# Source machine specific GSI-EnKF modules
set +x
source "${HOMEgfs}/ush/module-setup.sh"
module use "${HOMEgfs}/sorc/gsi_enkf.fd/modulefiles"
module load gsi_"${MACHINE_ID}"

module list
unset MACHINE_ID
set_trace
fi

export job="anal"
export jobid="${job}.$$"
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33 changes: 30 additions & 3 deletions jobs/rocoto/eobs.sh
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Original file line number Diff line number Diff line change
Expand Up @@ -4,9 +4,36 @@ source "${HOMEgfs}/ush/preamble.sh"

###############################################################
# Source FV3GFS workflow modules
. ${HOMEgfs}/ush/load_fv3gfs_modules.sh
status=$?
[[ ${status} -ne 0 ]] && exit ${status}
#. ${HOMEgfs}/ush/load_fv3gfs_modules.sh
#status=$?
#[[ ${status} -ne 0 ]] && exit ${status}

# TODO: clean this up
#Source appropriate modulefiles based on machine

source "${HOMEgfs}/ush/detect_machine.sh"
if [[ "${MACHINE_ID}" = "wcoss2" ]]; then
# Source FV3GFS workflow modules
. "${HOMEgfs}"/ush/load_fv3gfs_modules.sh
status=$?
[[ ${status} -ne 0 ]] && exit "${status}"
else
# Append compiler (only on machines that have multiple compilers)
COMPILER=${COMPILER:-"intel"}
if [[ "${MACHINE_ID}" = "hera" ]] || [[ "${MACHINE_ID}" = "cheyenne" ]]; then
MACHINE_ID=${MACHINE_ID}.${COMPILER}
fi

# Source machine specific GSI-EnKF modules
set +x
source "${HOMEgfs}/ush/module-setup.sh"
module use "${HOMEgfs}/sorc/gsi_enkf.fd/modulefiles"
module load gsi_"${MACHINE_ID}"

module list
unset MACHINE_ID
set_trace
fi

export job="eobs"
export jobid="${job}.$$"
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33 changes: 30 additions & 3 deletions jobs/rocoto/eupd.sh
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Original file line number Diff line number Diff line change
Expand Up @@ -4,9 +4,36 @@ source "${HOMEgfs}/ush/preamble.sh"

###############################################################
# Source FV3GFS workflow modules
. ${HOMEgfs}/ush/load_fv3gfs_modules.sh
status=$?
[[ ${status} -ne 0 ]] && exit ${status}
#. ${HOMEgfs}/ush/load_fv3gfs_modules.sh
#status=$?
#[[ ${status} -ne 0 ]] && exit ${status}

# TODO: clean this up
#Source appropriate modulefiles based on machine

source "${HOMEgfs}/ush/detect_machine.sh"
if [[ "${MACHINE_ID}" = "wcoss2" ]]; then
# Source FV3GFS workflow modules
. "${HOMEgfs}"/ush/load_fv3gfs_modules.sh
status=$?
[[ ${status} -ne 0 ]] && exit "${status}"
else
# Append compiler (only on machines that have multiple compilers)
COMPILER=${COMPILER:-"intel"}
if [[ "${MACHINE_ID}" = "hera" ]] || [[ "${MACHINE_ID}" = "cheyenne" ]]; then
MACHINE_ID=${MACHINE_ID}.${COMPILER}
fi

# Source machine specific GSI-EnKF modules
set +x
source "${HOMEgfs}/ush/module-setup.sh"
module use "${HOMEgfs}/sorc/gsi_enkf.fd/modulefiles"
module load gsi_"${MACHINE_ID}"

module list
unset MACHINE_ID
set_trace
fi

export job="eupd"
export jobid="${job}.$$"
Expand Down