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Merge branch 'develop' into feature/ocn-letkf-init
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@CoryMartin-NOAA
CoryMartin-NOAA committed Jul 9, 2024
2 parents 42c83a4 + 8998ec7 commit f01fe05
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171 changes: 87 additions & 84 deletions parm/archive/master_enkf.yaml.j2
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Original file line number Diff line number Diff line change
Expand Up @@ -6,108 +6,111 @@

# Split IAUFHRS into a list; typically either "3,6,9" or 6 (integer)
{% if IAUFHRS is string %}
# "3,6,9"
{% set iaufhrs = [] %}
{% for iaufhr in IAUFHRS.split(",") %}
{% do iaufhrs.append(iaufhr | int) %}
{% endfor %}
# "3,6,9"
{% set iaufhrs = [] %}
{% for iaufhr in IAUFHRS.split(",") %}
{% do iaufhrs.append(iaufhr | int) %}
{% endfor %}
{% else %}
# 6 (integer)
{% set iaufhrs = [IAUFHRS] %}
# 6 (integer)
{% set iaufhrs = [IAUFHRS] %}
{% endif %}

# Repeat for IAUFHRS_ENKF
{% if IAUFHRS_ENKF is string %}
{% set iaufhrs_enkf = [] %}
{% for iaufhr in IAUFHRS_ENKF.split(",") %}
{% do iaufhrs_enkf.append(iaufhr | int) %}
{% endfor %}
{% set iaufhrs_enkf = [] %}
{% for iaufhr in IAUFHRS_ENKF.split(",") %}
{% do iaufhrs_enkf.append(iaufhr | int) %}
{% endfor %}
{% else %}
{% set iaufhrs_enkf = [IAUFHRS_ENKF] %}
{% set iaufhrs_enkf = [IAUFHRS_ENKF] %}
{% endif %}

# Determine which data to archive
datasets:
{% if ENSGRP == 0 %}
{% filter indent(width=4) %}
# Archive the ensemble means and spreads
{% filter indent(width=4) %}
# Archive the ensemble means and spreads
{% include "enkf.yaml.j2" %}
{% endfilter %}
{% endfilter %}
{% else %}

# Archive individual member data
# First, construct individual member directories from templates
# COMIN_ATMOS_ANALYSIS_MEM, COMIN_ATMOS_HISTORY_MEM, and COMIN_ATMOS_RESTART_MEM

# Declare to-be-filled lists of member COM directories
{% set COMIN_ATMOS_ANALYSIS_MEM_list = [] %}
{% set COMIN_ATMOS_RESTART_MEM_list = [] %}
{% set COMIN_ATMOS_HISTORY_MEM_list = [] %}

# Determine which ensemble members belong to this group
{% set first_group_mem = (ENSGRP - 1) * NMEM_EARCGRP + 1 %}
{% set last_group_mem = [ ENSGRP * NMEM_EARCGRP, nmem_ens ] | min %}

# Construct member COM directories for the group
{% for mem in range(first_group_mem, last_group_mem + 1) %}

# Declare a dict of search and replace terms to run on each template
{% set tmpl_dict = {'ROTDIR':ROTDIR,
'RUN':RUN,
'YMD':cycle_YMD,
'HH':cycle_HH,
'MEMDIR':"mem" + '%03d' % mem} %}

# Replace template variables with tmpl_dict, one key at a time
# This must be done in a namespace to overcome jinja scoping
# Variables set inside of a for loop are lost at the end of the loop
# unless they are part of a namespace
{% set com_ns = namespace(COMIN_ATMOS_ANALYSIS_MEM = COM_ATMOS_ANALYSIS_TMPL,
COMIN_ATMOS_HISTORY_MEM = COM_ATMOS_HISTORY_TMPL,
COMIN_ATMOS_RESTART_MEM = COM_ATMOS_RESTART_TMPL) %}

{% for key in tmpl_dict.keys() %}
{% set search_term = '${' + key + '}' %}
{% set replace_term = tmpl_dict[key] %}
{% set com_ns.COMIN_ATMOS_ANALYSIS_MEM = com_ns.COMIN_ATMOS_ANALYSIS_MEM.replace(search_term, replace_term) %}
{% set com_ns.COMIN_ATMOS_HISTORY_MEM = com_ns.COMIN_ATMOS_HISTORY_MEM.replace(search_term, replace_term) %}
{% set com_ns.COMIN_ATMOS_RESTART_MEM = com_ns.COMIN_ATMOS_RESTART_MEM.replace(search_term, replace_term) %}
{% endfor %}

# Append the member COM directories
{% do COMIN_ATMOS_ANALYSIS_MEM_list.append(com_ns.COMIN_ATMOS_ANALYSIS_MEM)%}
{% do COMIN_ATMOS_HISTORY_MEM_list.append(com_ns.COMIN_ATMOS_HISTORY_MEM)%}
{% do COMIN_ATMOS_RESTART_MEM_list.append(com_ns.COMIN_ATMOS_RESTART_MEM)%}

{% endfor %}

# Archive member data
{% filter indent(width=4) %}
# Archive individual member data
# First, construct individual member directories from templates
# COMIN_ATMOS_ANALYSIS_MEM, COMIN_ATMOS_HISTORY_MEM, and COMIN_ATMOS_RESTART_MEM

# Declare to-be-filled lists of member COM directories
{% set COMIN_ATMOS_ANALYSIS_MEM_list = [] %}
{% set COMIN_ATMOS_RESTART_MEM_list = [] %}
{% set COMIN_ATMOS_HISTORY_MEM_list = [] %}

# Determine which ensemble members belong to this group
{% set first_group_mem = (ENSGRP - 1) * NMEM_EARCGRP + 1 %}
{% set last_group_mem = [ ENSGRP * NMEM_EARCGRP, nmem_ens ] | min %}

# Construct member COM directories for the group
{% for mem in range(first_group_mem, last_group_mem + 1) %}

# Declare a dict of search and replace terms to run on each template
{% set tmpl_dict = {'ROTDIR':ROTDIR,
'RUN':RUN,
'YMD':cycle_YMD,
'HH':cycle_HH,
'MEMDIR':"mem" + '%03d' % mem} %}

# Replace template variables with tmpl_dict, one key at a time
# This must be done in a namespace to overcome jinja scoping
# Variables set inside of a for loop are lost at the end of the loop
# unless they are part of a namespace
{% set com_ns = namespace(COMIN_ATMOS_ANALYSIS_MEM = COM_ATMOS_ANALYSIS_TMPL,
COMIN_ATMOS_HISTORY_MEM = COM_ATMOS_HISTORY_TMPL,
COMIN_ATMOS_RESTART_MEM = COM_ATMOS_RESTART_TMPL) %}

{% for key in tmpl_dict.keys() %}
{% set search_term = '${' + key + '}' %}
{% set replace_term = tmpl_dict[key] %}
{% set com_ns.COMIN_ATMOS_ANALYSIS_MEM =
com_ns.COMIN_ATMOS_ANALYSIS_MEM.replace(search_term, replace_term) %}
{% set com_ns.COMIN_ATMOS_HISTORY_MEM =
com_ns.COMIN_ATMOS_HISTORY_MEM.replace(search_term, replace_term) %}
{% set com_ns.COMIN_ATMOS_RESTART_MEM =
com_ns.COMIN_ATMOS_RESTART_MEM.replace(search_term, replace_term) %}
{% endfor %}

# Append the member COM directories
{% do COMIN_ATMOS_ANALYSIS_MEM_list.append(com_ns.COMIN_ATMOS_ANALYSIS_MEM)%}
{% do COMIN_ATMOS_HISTORY_MEM_list.append(com_ns.COMIN_ATMOS_HISTORY_MEM)%}
{% do COMIN_ATMOS_RESTART_MEM_list.append(com_ns.COMIN_ATMOS_RESTART_MEM)%}

{% endfor %}

# Archive member data
{% filter indent(width=4) %}
{% include "enkf_grp.yaml.j2" %}
{% endfilter %}
{% endfilter %}

# Determine if restarts should be saved
{% set save_warm_start_forecast, save_warm_start_cycled = ( False, False ) %}
# Determine if restarts should be saved
{% set save_warm_start_forecast, save_warm_start_cycled = ( False, False ) %}

# Save the increments and restarts every ARCH_WARMICFREQ days
# The ensemble increments (group a) should be saved on the ARCH_CYC
{% if (current_cycle - SDATE).days % ARCH_WARMICFREQ == 0 %}
{% if ARCH_CYC == cycle_HH | int %}
{% filter indent(width=4) %}
# Save the increments and restarts every ARCH_WARMICFREQ days
# The ensemble increments (group a) should be saved on the ARCH_CYC
{% if (current_cycle - SDATE).days % ARCH_WARMICFREQ == 0 %}
{% if ARCH_CYC == cycle_HH | int %}
{% filter indent(width=4) %}
{% include "enkf_restarta_grp.yaml.j2" %}
{% endfilter %}
{% endif %}
{% endif %}

# The ensemble ICs (group b) are restarts and always lag increments by assim_freq
{% set ics_offset = (assim_freq | string + "H") | to_timedelta %}
{% if (current_cycle | add_to_datetime(ics_offset) - SDATE).days % ARCH_WARMICFREQ == 0 %}
{% if (ARCH_CYC - assim_freq) % 24 == cycle_HH | int %}
{% filter indent(width=4) %}
{% endfilter %}
{% endif %}
{% endif %}

# The ensemble ICs (group b) are restarts and always lag increments by assim_freq
{% set ics_offset = (assim_freq | string + "H") | to_timedelta %}
{% if (current_cycle | add_to_datetime(ics_offset) - SDATE).days % ARCH_WARMICFREQ == 0 %}
{% if (ARCH_CYC - assim_freq) % 24 == cycle_HH | int %}
{% filter indent(width=4) %}
{% include "enkf_restartb_grp.yaml.j2" %}
{% endfilter %}
{% endif %}
{% endif %}
{% endfilter %}
{% endif %}
{% endif %}

# End of individual member archiving
# End of individual member archiving
{% endif %}
124 changes: 65 additions & 59 deletions parm/archive/master_gdas.yaml.j2
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Original file line number Diff line number Diff line change
Expand Up @@ -5,12 +5,12 @@

# Split IAUFHRS into a list; typically either "3,6,9" or 6 (integer)
{% if IAUFHRS is string %}
{% set iaufhrs = [] %}
{% for iaufhr in IAUFHRS.split(",") %}
{% do iaufhrs.append(iaufhr | int) %}
{% endfor %}
{% set iaufhrs = [] %}
{% for iaufhr in IAUFHRS.split(",") %}
{% do iaufhrs.append(iaufhr | int) %}
{% endfor %}
{% else %}
{% set iaufhrs = [IAUFHRS] %}
{% set iaufhrs = [IAUFHRS] %}
{% endif %}

datasets:
Expand All @@ -20,84 +20,90 @@ datasets:
{% endfilter %}

{% if DO_ICE %}
# Ice data
{% filter indent(width=4) %}
# Ice data
{% filter indent(width=4) %}
{% include "gdasice.yaml.j2" %}
{% endfilter %}
{% endfilter %}
{% endif %}

{% if DO_OCN %}
# Ocean forecast products
{% filter indent(width=4) %}
# Ocean forecast products
{% filter indent(width=4) %}
{% include "gdasocean.yaml.j2" %}
{% endfilter %}
{% if DO_JEDIOCNVAR and MODE == "cycled" %}
# Ocean analysis products
{% filter indent(width=4) %}
{% endfilter %}
{% if DO_JEDIOCNVAR and MODE == "cycled" %}
# Ocean analysis products
{% filter indent(width=4) %}
{% include "gdasocean_analysis.yaml.j2" %}
{% endfilter %}
{% endif %}
{% endfilter %}
{% endif %}
{% endif %}

{% if DO_WAVE %}
# Wave products
{% filter indent(width=4) %}
# Wave products
{% filter indent(width=4) %}
{% include "gdaswave.yaml.j2" %}
{% endfilter %}
{% endfilter %}
{% endif %}

{% if MODE == "cycled" %}
# Determine if we will save restart ICs or not (only valid for cycled)
{% set save_warm_start_forecast, save_warm_start_cycled = ( False, False ) %}
# Determine if we will save restart ICs or not (only valid for cycled)
{% set save_warm_start_forecast, save_warm_start_cycled = ( False, False ) %}

{% if ARCH_CYC == cycle_HH | int%}
# Save the warm and forecast-only cycle ICs every ARCH_WARMICFREQ days
{% if (current_cycle - SDATE).days % ARCH_WARMICFREQ == 0 %}
{% set save_warm_start_forecast = True %}
{% set save_warm_start_cycled = True %}
# Save the forecast-only restarts every ARCH_FCSTICFREQ days
{% elif (current_cycle - SDATE).days % ARCH_FCSTICFREQ == 0 %}
{% set save_warm_start_forecast = True %}
{% endif %}
{% endif %}
{% if ARCH_CYC == cycle_HH | int%}
# Save the forecast-only cycle ICs every ARCH_WARMICFREQ or ARCH_FCSTICFREQ days
{% if (current_cycle - SDATE).days % ARCH_WARMICFREQ == 0 %}
{% set save_warm_start_forecast = True %}
{% elif (current_cycle - SDATE).days % ARCH_FCSTICFREQ == 0 %}
{% set save_warm_start_forecast = True %}
{% endif %}
{% endif %}

{% if save_warm_start_forecast %}
# Save warm start forecast-only data
# Atmosphere restarts
{% filter indent(width=4) %}
# The GDAS ICs (group b) are restarts and always lag increments by assim_freq
{% if (ARCH_CYC - assim_freq) % 24 == cycle_HH | int %}
{% set ics_offset = (assim_freq | string + "H") | to_timedelta %}
{% if (current_cycle | add_to_datetime(ics_offset) - SDATE).days % ARCH_WARMICFREQ == 0 %}
{% set save_warm_start_cycled = True %}
{% endif %}
{% endif %}

{% if save_warm_start_forecast %}
# Save warm start forecast-only data
# Atmosphere restarts
{% filter indent(width=4) %}
{% include "gdas_restarta.yaml.j2" %}
{% endfilter %}
{% endfilter %}

{% if DO_WAVE %}
# Wave restarts
{% filter indent(width=4) %}
{% if DO_WAVE %}
# Wave restarts
{% filter indent(width=4) %}
{% include "gdaswave_restart.yaml.j2" %}
{% endfilter %}
{% endif %}
{% endfilter %}
{% endif %}

{% if DO_OCN %}
# Ocean restarts
{% filter indent(width=4) %}
{% if DO_OCN %}
# Ocean restarts
{% filter indent(width=4) %}
{% include "gdasocean_restart.yaml.j2" %}
{% endfilter %}
{% endif %}
{% endfilter %}
{% endif %}

{% if DO_ICE %}
# Ice restarts
{% filter indent(width=4) %}
{% if DO_ICE %}
# Ice restarts
{% filter indent(width=4) %}
{% include "gdasice_restart.yaml.j2" %}
{% endfilter %}
{% endif %}
{% endfilter %}
{% endif %}

# End of forecast-only restarts
{% endif %}
# End of forecast-only restarts
{% endif %}

{% if save_warm_start_cycled %}
# Save warm start cycled restarts
{% filter indent(width=4) %}
{% if save_warm_start_cycled %}
# Save warm start cycled restarts
{% filter indent(width=4) %}
{% include "gdas_restartb.yaml.j2" %}
{% endfilter %}
{% endif %}
{% endfilter %}
{% endif %}

# End of restart checking
# End of restart checking
{% endif %}
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