Feature/b2i

[givelberg]

6 bufr to ioda converters
this is second refactoring of the code.
the variables are grouped into metadata, obs and additional ioda vars
metadata is read from a yaml file (could also be a json file)
additional variables now include ocean basin
converters generate log files and have a command line option to test
the log against a reference file
Log files contain some human readable data, as well as cryptographic
hash strings computed from the variables.
Simple utilities to plot data are included.

[guillaumevernieres]

@givelberg , your branch is behind develop and the code norm is failing ...

[guillaumevernieres]

I'll run the test manually @givelberg , since I broke everything earlier today ...

[guillaumevernieres]

I'll run the test manually @givelberg , since I broke everything earlier today ...

great, the build failed. Probably an issue on my side. I'll run the ci and cherry pick the ctests relevant to your changes @givelberg .

[guillaumevernieres]

See comments.

[emcbot]

Automated Global-Workflow GDASApp Testing Results:
Machine: hera

Start: Wed Sep 18 20:21:03 UTC 2024 on hfe02
---------------------------------------------------
Build:                                 *SUCCESS*
Build: Completed at Wed Sep 18 21:05:53 UTC 2024
---------------------------------------------------
Tests:                                  *Failed*
Tests: Failed at Thu Sep 19 00:55:44 UTC 2024
Tests: 65% tests passed, 16 tests failed out of 46
	1892 - test_gdasapp_WCDA-3DVAR-C48mx500_gdasfcst_202103241200 (Failed)
	1893 - test_gdasapp_WCDA-3DVAR-C48mx500_gdasprepoceanobs_202103241800 (Failed)
	1902 - test_gdasapp_atm_jjob_var_init (Failed)
	1903 - test_gdasapp_atm_jjob_var_run (Failed)
	1904 - test_gdasapp_atm_jjob_var_inc (Failed)
	1905 - test_gdasapp_atm_jjob_var_final (Failed)
	1906 - test_gdasapp_atm_jjob_ens_init (Failed)
	1912 - test_gdasapp_atm_jjob_ens_final (Failed)
Tests: see output at /scratch1/NCEPDEV/da/role.jedipara/CI/GDASApp/workflow/PR/1275/global-workflow/sorc/gdas.cd/build/log.ctest

[emcbot]

Automated Global-Workflow GDASApp Testing Results:
Machine: hera

Start: Thu Sep 26 22:27:42 UTC 2024 on hfe02
---------------------------------------------------
Build:                                 *SUCCESS*
Build: Completed at Thu Sep 26 23:16:18 UTC 2024
---------------------------------------------------
Tests:                                  *Failed*
Tests: Failed at Thu Sep 26 23:56:04 UTC 2024
Tests: 87% tests passed, 6 tests failed out of 46
	1903 - test_gdasapp_atm_jjob_var_init (Failed)
	1904 - test_gdasapp_atm_jjob_var_run (Failed)
	1905 - test_gdasapp_atm_jjob_var_inc (Failed)
	1906 - test_gdasapp_atm_jjob_var_final (Failed)
	1907 - test_gdasapp_atm_jjob_ens_init (Failed)
	1908 - test_gdasapp_atm_jjob_ens_letkf (Failed)
Tests: see output at /scratch1/NCEPDEV/da/role.jedipara/CI/GDASApp/workflow/PR/1275/global-workflow/sorc/gdas.cd/build/log.ctest

[guillaumevernieres]

I'm going to merge this @givelberg , but your tests were not triggered in the hera ci.