netcdfread
: safer version handling for Conventions
property
#739
Workflow file for this run
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# A GitHub Action to run the cfdm test suite after events on main. | ||
name: Run test suite | ||
# Triggers the workflow on push or PR events for the main branch (only) | ||
on: | ||
push: | ||
branches: | ||
- main | ||
pull_request: | ||
# default (from docs) is just on [opened, synchronize, reopened] | ||
types: [opened, reopened, ready_for_review, edited] | ||
branches: | ||
- main | ||
# Note a workflow can have 1+ jobs that can run sequentially or in parallel. | ||
jobs: | ||
run-test-suite-job: | ||
# Set-up the build matrix. We run on different distros and Python versions. | ||
strategy: | ||
matrix: | ||
os: [ubuntu-latest, ubuntu-18.04, macos-latest, macos-10.15] | ||
# Note: keep versions quoted as strings else 3.10 taken as 3.1, etc. | ||
python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"] | ||
# Run on new and old(er) versions of the distros we support (Linux, Mac OS) | ||
runs-on: ${{ matrix.os }} | ||
# The sequence of tasks that will be executed as part of this job: | ||
steps: | ||
- name: Checkout | ||
uses: actions/checkout@v2 | ||
# Provide a notification message | ||
- name: Notify about setup | ||
run: echo Now setting up the environment for the cfdm test suite... | ||
# Prepare to run the test-suite on different versions of Python 3: | ||
- name: Set up Python ${{ matrix.python-version }} | ||
uses: actions/setup-python@v1 | ||
with: | ||
python-version: ${{ matrix.python-version }} | ||
# Setup conda, which is the simplest way to access all dependencies, | ||
# especially as some are C-based so otherwise difficult to setup. | ||
- name: Setup Miniconda | ||
uses: conda-incubator/setup-miniconda@v2 | ||
with: | ||
miniconda-version: "latest" | ||
activate-environment: cfdm-latest | ||
python-version: ${{ matrix.python-version }} | ||
channels: anaconda | ||
# Ensure shell is configured with conda activated and pip up-to-date: | ||
- name: Check conda config | ||
shell: bash -l {0} | ||
run: | | ||
conda info | ||
conda list | ||
conda config --show-sources | ||
conda config --show | ||
pip install --upgrade pip | ||
# Install cfdm dependencies pre-testing | ||
# We do so with conda which was setup in a previous step. | ||
- name: Install cfdm with its dependencies | ||
shell: bash -l {0} | ||
run: | | ||
# Install dependencies required for the tests: | ||
conda install -c anaconda libnetcdf | ||
pip install pycodestyle | ||
# Install Python-based deps and our dev version of cfdm to test: | ||
pip install netCDF4 | ||
pip install -e . | ||
# Install the coverage library | ||
# We do so with conda which was setup in a previous step. | ||
- name: Install coverage | ||
shell: bash -l {0} | ||
run: | | ||
conda install coverage | ||
# Provide another notification message | ||
- name: Notify about starting testing | ||
run: echo Setup complete. Now starting to run the cfdm test suite... | ||
# Finally run the test suite and generate a coverage report! | ||
- name: Run test suite and generate a coverage report | ||
shell: bash -l {0} | ||
run: | | ||
cd cfdm/test | ||
./run_tests_and_coverage --nohtml | ||
# For one job only, generate a coverage report: | ||
- name: Upload coverage report to Codecov | ||
# Get coverage from only one job (choose with Ubuntu Python 3.9 as | ||
# representative). Note that we could use a separate workflow | ||
# to setup Codecov reports, but given the amount of steps required to | ||
# install including dependencies via conda, that a separate workflow | ||
# would have to run anyway, it is simplest to add it in this flow. | ||
# Also, it means code coverage is only generated if the test suite is | ||
# passing at least for that job, avoiding useless coverage reports. | ||
uses: codecov/codecov-action@v1 | ||
if: | | ||
Check failure on line 106 in .github/workflows/run-test-suite.yml GitHub Actions / Run test suiteInvalid workflow file
|
||
matrix.os == "ubuntu-latest" && matrix.python-version == "3.9" | ||
with: | ||
file: ./cfdm/test/cfdm_coverage_reports/coverage.xml | ||
fail_ci_if_error: true | ||
flags: unittests | ||
name: codecov-umbrella | ||
# End with a message indicating the suite has completed its run | ||
- name: Notify about a completed run | ||
run: | | ||
echo The cfdm test suite run has completed. |