During the Winter 2024 semester, the first Testing Phase of MEDomicsLab will take place. We would love to have you join the effort and provide feedback during this Testing Phase, prior to a first official release of MEDomicsLab! Our intent is to properly recognize all the participants of the Testing Phase when the first official release will come. For an overview of the vision that we have for the platform, please visit this link: vision.
- To participate to the Testing Phase, please fill out the following form: FORM.
- See the list of current participants: PARTICIPANTS.
We anticipate that the participation to the Testing Phase will involve 1 hour of work per week for 17 consecutive weeks, starting January 15, 2024. Please also note that no programming is involved and that the tutorials can be performed on a laptop.
The schedule of the Testing Phase (2024) and the series of tutorials are planned as follows:
- Step 1 - Install and Explore : Jan 15 – Jan 29
- Step 2 - Extract Data: Jan 29 – Feb 12
- Step 3 - Prepare ML tables: Feb 12 – Feb 26
- Step 4 - Explore Data: Feb 26 – Mar 11
- Step 5 - Vacations: Mar 11 – Mar 25
- Step 6 - Create Model: Mar 25 – Apr 8
- Step 7 - Evaluate & Apply Model: Apr 8 – Apr 22
- Step 8 - Challenge: Apr 22 – May 13
Please note that an Information Session about the Testing Phase was held on December 15, 2023. You can find the recording of the session here: Information Session.
As part of the Testing Phase, we will also host online Q&A sessions to answer your questions. These sessions are planned for every Friday from January 12 to May 10, 10-11AM Eastern Time.
Finally, we also plan to have a Wrap-Up meeting related to the Testing Phase on May 17, from 10AM to 12PM Eastern Time.
The participation in the Testing Phase will involve the use of data from the MIMIC database. We have already processed the MIMIC data for the purpose of the Testing Phase. To share this processed data with you, we need you to complete the following:
- Become a credential user of MIMIC
- Complete the CITI Course
- Sign the following four Physionet data use agreements: (i) MIMIC-IV; (ii) MIMIC-CXR; (iii) MIMIC-IV-ED; and (iv) MIMIC-IV-Note
- Send us the 5 forms (CITI Course certification + 4 signed data use agreements) to [email protected]
This process related to accessing MIMIC data will take some time, but we assure you it will be worth it!
We also created a video to help you with this process : Access MIMIC data.
For any question, please contact [email protected].
