Change the image acquisition behaviour of NiftiImage #130
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name: Coverage | |
on: [push, pull_request] | |
jobs: | |
Coverage: | |
runs-on: [self-hosted, ubuntu-22.04, gpu] | |
steps: | |
- uses: actions/checkout@v3 | |
- name: Install dependencies | |
run: sudo apt-get update && sudo apt-get install -y cmake git lcov | |
- name: Install Catch2 | |
run: | | |
git clone https://github.com/catchorg/Catch2.git | |
cd Catch2 | |
cmake -Bbuild -H. -DBUILD_TESTING=OFF | |
sudo cmake --build build/ --target install --config Debug | |
- name: Configure NiftyReg | |
run: | | |
mkdir build | |
cd build | |
cmake -DCMAKE_C_COMPILER=gcc \ | |
-DCMAKE_CXX_COMPILER=g++ \ | |
-DCMAKE_BUILD_TYPE=Debug \ | |
-DBUILD_ALL_DEP=ON \ | |
-DUSE_CUDA=ON \ | |
-DUSE_OPENCL=OFF \ | |
-DUSE_SSE=OFF \ | |
-DUSE_OPENMP=OFF \ | |
-DBUILD_TESTING=ON \ | |
-DWITH_COVERAGE=ON \ | |
.. | |
- name: Build NiftyReg | |
run: cmake --build build --config Debug | |
- name: Run tests | |
working-directory: build | |
run: ctest -V | |
- name: Coverage | |
working-directory: build | |
run: make coverage | |
- name: Upload coverage to Codecov | |
uses: codecov/codecov-action@v3 | |
with: | |
directory: build | |
env: | |
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} |