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CompatHelper: bump compat for Symbolics to 6, (keep existing compat) #546

CompatHelper: bump compat for Symbolics to 6, (keep existing compat)

CompatHelper: bump compat for Symbolics to 6, (keep existing compat) #546

Triggered via pull request November 19, 2024 01:49
Status Failure
Total duration 10m 19s
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10 errors and 1 warning
build: ../../../.julia/packages/Documenter/Bs999/src/utilities/utilities.jl#L44
failed to run `@example` block in src/generated/gas_network.md:259-262 ```@example gas_network @nAmed v1_mtk = ConstantPressureNode(p_set=p₁_set) v1 = VertexFunction(v1_mtk, [:q̃_nw], [:p]; name=:v1, vidx=1) ``` exception = ArgumentError: Output p(t) was neither foundin states nor in observed equations. Stacktrace: [1] (::MTKExt.var"#43#53"{Vector{Equation}, Vector{Any}})(out::SymbolicUtils.BasicSymbolic{Real}) @ MTKExt ~/work/NetworkDynamics.jl/NetworkDynamics.jl/ext/MTKExt.jl:278 [2] iterate @ ./generator.jl:48 [inlined] [3] grow_to! @ ./array.jl:853 [inlined] [4] collect(itr::Base.Generator{Base.Iterators.Flatten{Tuple{Vector{SymbolicUtils.BasicSymbolic{Real}}}}, MTKExt.var"#43#53"{Vector{Equation}, Vector{Any}}}) @ Base ./array.jl:777 [5] map(f::Function, A::Base.Iterators.Flatten{Tuple{Vector{SymbolicUtils.BasicSymbolic{Real}}}}) @ Base ./abstractarray.jl:3399 [6] generate_io_function(_sys::ODESystem, inputss::Tuple{Vector{Symbol}}, outputss::Tuple{Vector{Symbol}}; expression::Type, verbose::Bool) @ MTKExt ~/work/NetworkDynamics.jl/NetworkDynamics.jl/ext/MTKExt.jl:272 [7] generate_io_function @ ~/work/NetworkDynamics.jl/NetworkDynamics.jl/ext/MTKExt.jl:194 [inlined] [8] VertexFunction(sys::ODESystem, inputs::Vector{Symbol}, outputs::Vector{Symbol}; verbose::Bool, name::Symbol, kwargs::@kwargs{vidx::Int64}) @ MTKExt ~/work/NetworkDynamics.jl/NetworkDynamics.jl/ext/MTKExt.jl:30 [9] top-level scope @ gas_network.md:261 [10] eval @ ./boot.jl:430 [inlined] [11] #60 @ ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:803 [inlined] [12] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String) @ Base.Filesystem ./file.jl:112 [13] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})() @ Documenter ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:802 [14] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})() @ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170 [15] with_logstate(f::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}}, logstate::Base.CoreLogging.LogState) @ Base.CoreLogging ./logging/logging.jl:522 [16] with_logger(f::Function, logger::Base.CoreLogging.ConsoleLogger) @ Base.CoreLogging ./logging/logging.jl:632 [17] capture(f::Documenter.var"#59#61"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any}) @ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167 [18] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document) @ Documenter ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:801
build: ../../../.julia/packages/Documenter/Bs999/src/utilities/utilities.jl#L44
failed to run `@example` block in src/generated/gas_network.md:264-267 ```@example gas_network @nAmed v2_mtk = VariablePressureNode(C=C₂, load_profile=load2) v2 = VertexFunction(v2_mtk, [:q̃_nw], [:p]; name=:v2, vidx=2) ``` exception = ExtraVariablesSystemException: The system is unbalanced. There are 3 highest order derivative variables and 2 equations. More variables than equations, here are the potential extra variable(s): In particular, the unset input(s) are: q̃_nw(t) The rest of potentially unset variable(s) are: p(t) q̃_nw(t) Note that the process of determining extra variables is a best-effort heuristic. The true extra variables are dependent on the model and may not be in this list. Stacktrace: [1] error_reporting(state::TearingState{ODESystem}, bad_idxs::Vector{Int64}, n_highest_vars::Int64, iseqs::Bool, orig_inputs::Set{Any}) @ ModelingToolkit.StructuralTransformations ~/.julia/packages/ModelingToolkit/89pF2/src/structural_transformation/utils.jl:50 [2] check_consistency(state::TearingState{ODESystem}, orig_inputs::Set{Any}) @ ModelingToolkit.StructuralTransformations ~/.julia/packages/ModelingToolkit/89pF2/src/structural_transformation/utils.jl:85 [3] _structural_simplify!(state::TearingState{ODESystem}, io::Tuple{Vector{Any}, Vector{SymbolicUtils.BasicSymbolic{Real}}}; simplify::Bool, check_consistency::Bool, fully_determined::Bool, warn_initialize_determined::Bool, dummy_derivative::Bool, kwargs::@kwargs{allow_symbolic::Bool, allow_parameter::Bool, conservative::Bool}) @ ModelingToolkit ~/.julia/packages/ModelingToolkit/89pF2/src/systems/systemstructure.jl:693 [4] _structural_simplify! @ ~/.julia/packages/ModelingToolkit/89pF2/src/systems/systemstructure.jl:676 [inlined] [5] structural_simplify!(state::TearingState{ODESystem}, io::Tuple{Vector{Any}, Vector{SymbolicUtils.BasicSymbolic{Real}}}; simplify::Bool, check_consistency::Bool, fully_determined::Bool, warn_initialize_determined::Bool, kwargs::@kwargs{allow_symbolic::Bool, allow_parameter::Bool, conservative::Bool}) @ ModelingToolkit ~/.julia/packages/ModelingToolkit/89pF2/src/systems/systemstructure.jl:635 [6] __structural_simplify(sys::ODESystem, io::Tuple{Vector{Any}, Vector{SymbolicUtils.BasicSymbolic{Real}}}; simplify::Bool, kwargs::@kwargs{allow_symbolic::Bool, allow_parameter::Bool, conservative::Bool, fully_determined::Bool}) @ ModelingToolkit ~/.julia/packages/ModelingToolkit/89pF2/src/systems/systems.jl:94 [7] structural_simplify(sys::ODESystem, io::Tuple{Vector{Any}, Vector{SymbolicUtils.BasicSymbolic{Real}}}; simplify::Bool, split::Bool, allow_symbolic::Bool, allow_parameter::Bool, conservative::Bool, fully_determined::Bool, kwargs::@kwargs{}) @ ModelingToolkit ~/.julia/packages/ModelingToolkit/89pF2/src/systems/systems.jl:33 [8] generate_io_function(_sys::ODESystem, inputss::Tuple{Vector{Symbol}}, outputss::Tuple{Vector{Symbol}}; expression::Type, verbose::Bool) @ MTKExt ~/work/NetworkDynamics.jl/NetworkDynamics.jl/ext/MTKExt.jl:220 [9] generate_io_function @ ~/work/NetworkDynamics.jl/NetworkDynamics.jl/ext/MTKExt.jl:194 [inlined] [10] VertexFunction(sys::ODESystem, inputs::Vector{Symbol}, outputs::Vector{Symbol}; verbose::Bool, name::Symbol, kwargs::@kwargs{vidx::Int64}) @ MTKExt ~/work/NetworkDynamics.jl/NetworkDynamics.jl/ext/MTKExt.jl:30 [11] top-level scope @ gas_network.md:266 [12] eval @ ./boot.jl:430 [inlined] [13] #60 @ ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:803 [inlined] [14] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String) @ Base.Filesystem ./file.jl:112 [15] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})() @ Documenter ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:802 [16] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{
build: ../../../.julia/packages/Documenter/Bs999/src/utilities/utilities.jl#L44
failed to run `@example` block in src/generated/gas_network.md:269-272 ```@example gas_network @nAmed v3_mtk = VariablePressureNode(C=C₃, load_profile=load3) v3 = VertexFunction(v3_mtk, [:q̃_nw], [:p]; name=:v3, vidx=3) ``` exception = ExtraVariablesSystemException: The system is unbalanced. There are 3 highest order derivative variables and 2 equations. More variables than equations, here are the potential extra variable(s): In particular, the unset input(s) are: q̃_nw(t) The rest of potentially unset variable(s) are: p(t) q̃_nw(t) Note that the process of determining extra variables is a best-effort heuristic. The true extra variables are dependent on the model and may not be in this list. Stacktrace: [1] error_reporting(state::TearingState{ODESystem}, bad_idxs::Vector{Int64}, n_highest_vars::Int64, iseqs::Bool, orig_inputs::Set{Any}) @ ModelingToolkit.StructuralTransformations ~/.julia/packages/ModelingToolkit/89pF2/src/structural_transformation/utils.jl:50 [2] check_consistency(state::TearingState{ODESystem}, orig_inputs::Set{Any}) @ ModelingToolkit.StructuralTransformations ~/.julia/packages/ModelingToolkit/89pF2/src/structural_transformation/utils.jl:85 [3] _structural_simplify!(state::TearingState{ODESystem}, io::Tuple{Vector{Any}, Vector{SymbolicUtils.BasicSymbolic{Real}}}; simplify::Bool, check_consistency::Bool, fully_determined::Bool, warn_initialize_determined::Bool, dummy_derivative::Bool, kwargs::@kwargs{allow_symbolic::Bool, allow_parameter::Bool, conservative::Bool}) @ ModelingToolkit ~/.julia/packages/ModelingToolkit/89pF2/src/systems/systemstructure.jl:693 [4] _structural_simplify! @ ~/.julia/packages/ModelingToolkit/89pF2/src/systems/systemstructure.jl:676 [inlined] [5] structural_simplify!(state::TearingState{ODESystem}, io::Tuple{Vector{Any}, Vector{SymbolicUtils.BasicSymbolic{Real}}}; simplify::Bool, check_consistency::Bool, fully_determined::Bool, warn_initialize_determined::Bool, kwargs::@kwargs{allow_symbolic::Bool, allow_parameter::Bool, conservative::Bool}) @ ModelingToolkit ~/.julia/packages/ModelingToolkit/89pF2/src/systems/systemstructure.jl:635 [6] __structural_simplify(sys::ODESystem, io::Tuple{Vector{Any}, Vector{SymbolicUtils.BasicSymbolic{Real}}}; simplify::Bool, kwargs::@kwargs{allow_symbolic::Bool, allow_parameter::Bool, conservative::Bool, fully_determined::Bool}) @ ModelingToolkit ~/.julia/packages/ModelingToolkit/89pF2/src/systems/systems.jl:94 [7] structural_simplify(sys::ODESystem, io::Tuple{Vector{Any}, Vector{SymbolicUtils.BasicSymbolic{Real}}}; simplify::Bool, split::Bool, allow_symbolic::Bool, allow_parameter::Bool, conservative::Bool, fully_determined::Bool, kwargs::@kwargs{}) @ ModelingToolkit ~/.julia/packages/ModelingToolkit/89pF2/src/systems/systems.jl:33 [8] generate_io_function(_sys::ODESystem, inputss::Tuple{Vector{Symbol}}, outputss::Tuple{Vector{Symbol}}; expression::Type, verbose::Bool) @ MTKExt ~/work/NetworkDynamics.jl/NetworkDynamics.jl/ext/MTKExt.jl:220 [9] generate_io_function @ ~/work/NetworkDynamics.jl/NetworkDynamics.jl/ext/MTKExt.jl:194 [inlined] [10] VertexFunction(sys::ODESystem, inputs::Vector{Symbol}, outputs::Vector{Symbol}; verbose::Bool, name::Symbol, kwargs::@kwargs{vidx::Int64}) @ MTKExt ~/work/NetworkDynamics.jl/NetworkDynamics.jl/ext/MTKExt.jl:30 [11] top-level scope @ gas_network.md:271 [12] eval @ ./boot.jl:430 [inlined] [13] #60 @ ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:803 [inlined] [14] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String) @ Base.Filesystem ./file.jl:112 [15] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})() @ Documenter ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:802 [16] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{
build: ../../../.julia/packages/Documenter/Bs999/src/utilities/utilities.jl#L44
failed to run `@example` block in src/generated/gas_network.md:279-287 ```@example gas_network @nAmed e12_mtk = Pipe(; L=L₁₂, sinθ=sinθ₁₂, D, A, γ, η, r, g, T, Tc, pc, Rs, c̃, ρ̃, p̃) @nAmed e13_mtk = Pipe(; L=L₁₃, sinθ=sinθ₁₃, D, A, γ, η, r, g, T, Tc, pc, Rs, c̃, ρ̃, p̃) @nAmed e23_mtk = Pipe(; L=L₂₃, sinθ=sinθ₂₃, D, A, γ, η, r, g, T, Tc, pc, Rs, c̃, ρ̃, p̃) e12 = EdgeFunction(e12_mtk, [:p_src], [:p_dst], AntiSymmetric([:q̃]); name=:e12, src=1, dst=2) e13 = EdgeFunction(e13_mtk, [:p_src], [:p_dst], AntiSymmetric([:q̃]); name=:e13, src=1, dst=3) e23 = EdgeFunction(e23_mtk, [:p_src], [:p_dst], AntiSymmetric([:q̃]); name=:e23, src=2, dst=3) ``` exception = ExtraVariablesSystemException: The system is unbalanced. There are 10 highest order derivative variables and 8 equations. More variables than equations, here are the potential extra variable(s): In particular, the unset input(s) are: p_dst(t) The rest of potentially unset variable(s) are: q̃(t) λe(t) p_dst(t) Note that the process of determining extra variables is a best-effort heuristic. The true extra variables are dependent on the model and may not be in this list. Stacktrace: [1] error_reporting(state::TearingState{ODESystem}, bad_idxs::Vector{Int64}, n_highest_vars::Int64, iseqs::Bool, orig_inputs::Set{Any}) @ ModelingToolkit.StructuralTransformations ~/.julia/packages/ModelingToolkit/89pF2/src/structural_transformation/utils.jl:50 [2] check_consistency(state::TearingState{ODESystem}, orig_inputs::Set{Any}) @ ModelingToolkit.StructuralTransformations ~/.julia/packages/ModelingToolkit/89pF2/src/structural_transformation/utils.jl:85 [3] _structural_simplify!(state::TearingState{ODESystem}, io::Tuple{Vector{Any}, Vector{SymbolicUtils.BasicSymbolic{Real}}}; simplify::Bool, check_consistency::Bool, fully_determined::Bool, warn_initialize_determined::Bool, dummy_derivative::Bool, kwargs::@kwargs{allow_symbolic::Bool, allow_parameter::Bool, conservative::Bool}) @ ModelingToolkit ~/.julia/packages/ModelingToolkit/89pF2/src/systems/systemstructure.jl:693 [4] _structural_simplify! @ ~/.julia/packages/ModelingToolkit/89pF2/src/systems/systemstructure.jl:676 [inlined] [5] structural_simplify!(state::TearingState{ODESystem}, io::Tuple{Vector{Any}, Vector{SymbolicUtils.BasicSymbolic{Real}}}; simplify::Bool, check_consistency::Bool, fully_determined::Bool, warn_initialize_determined::Bool, kwargs::@kwargs{allow_symbolic::Bool, allow_parameter::Bool, conservative::Bool}) @ ModelingToolkit ~/.julia/packages/ModelingToolkit/89pF2/src/systems/systemstructure.jl:635 [6] __structural_simplify(sys::ODESystem, io::Tuple{Vector{Any}, Vector{SymbolicUtils.BasicSymbolic{Real}}}; simplify::Bool, kwargs::@kwargs{allow_symbolic::Bool, allow_parameter::Bool, conservative::Bool, fully_determined::Bool}) @ ModelingToolkit ~/.julia/packages/ModelingToolkit/89pF2/src/systems/systems.jl:94 [7] structural_simplify(sys::ODESystem, io::Tuple{Vector{Any}, Vector{SymbolicUtils.BasicSymbolic{Real}}}; simplify::Bool, split::Bool, allow_symbolic::Bool, allow_parameter::Bool, conservative::Bool, fully_determined::Bool, kwargs::@kwargs{}) @ ModelingToolkit ~/.julia/packages/ModelingToolkit/89pF2/src/systems/systems.jl:33 [8] generate_io_function(_sys::ODESystem, inputss::Tuple{Vector{Symbol}, Vector{Symbol}}, outputss::Tuple{Vector{Symbol}}; expression::Type, verbose::Bool) @ MTKExt ~/work/NetworkDynamics.jl/NetworkDynamics.jl/ext/MTKExt.jl:220 [9] generate_io_function @ ~/work/NetworkDynamics.jl/NetworkDynamics.jl/ext/MTKExt.jl:194 [inlined] [10] EdgeFunction(sys::ODESystem, srcin::Vector{Symbol}, dstin::Vector{Symbol}, srcout::Nothing, dstout::NetworkDynamics.AnnotatedSym{AntiSymmetric}; verbose::Bool, name::Symbol, kwargs::@kwargs{src::Int64, dst::Int64}) @ MTKExt ~/work/NetworkDynamics.jl/NetworkDynamics.jl/ext/MTKExt.jl:106 [11] EdgeFunction @ ~/work/NetworkDynamics.jl/NetworkDynamics.jl/ext/MTKExt.jl:84 [in
build: ../../../.julia/packages/Documenter/Bs999/src/utilities/utilities.jl#L44
failed to run `@example` block in src/generated/gas_network.md:297-299 ```@example gas_network nw = Network([v1, v2, v3], [e12, e13, e23]) ``` exception = UndefVarError: `v1` not defined in `Main.__atexample__named__gas_network` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] top-level scope @ gas_network.md:298 [2] eval @ ./boot.jl:430 [inlined] [3] #60 @ ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:803 [inlined] [4] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String) @ Base.Filesystem ./file.jl:112 [5] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})() @ Documenter ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:802 [6] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})() @ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170 [7] with_logstate(f::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}}, logstate::Base.CoreLogging.LogState) @ Base.CoreLogging ./logging/logging.jl:522 [8] with_logger(f::Function, logger::Base.CoreLogging.ConsoleLogger) @ Base.CoreLogging ./logging/logging.jl:632 [9] capture(f::Documenter.var"#59#61"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any}) @ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167 [10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document) @ Documenter ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:801
build: ../../../.julia/packages/Documenter/Bs999/src/utilities/utilities.jl#L44
failed to run `@example` block in src/generated/gas_network.md:311-313 ```@example gas_network uguess = NWState(nw) ``` exception = UndefVarError: `nw` not defined in `Main.__atexample__named__gas_network` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] top-level scope @ gas_network.md:312 [2] eval @ ./boot.jl:430 [inlined] [3] #60 @ ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:803 [inlined] [4] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String) @ Base.Filesystem ./file.jl:112 [5] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})() @ Documenter ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:802 [6] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})() @ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170 [7] with_logstate(f::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}}, logstate::Base.CoreLogging.LogState) @ Base.CoreLogging ./logging/logging.jl:522 [8] with_logger(f::Function, logger::Base.CoreLogging.ConsoleLogger) @ Base.CoreLogging ./logging/logging.jl:632 [9] capture(f::Documenter.var"#59#61"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any}) @ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167 [10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document) @ Documenter ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:801
build: ../../../.julia/packages/Documenter/Bs999/src/utilities/utilities.jl#L44
failed to run `@example` block in src/generated/gas_network.md:321-328 ```@example gas_network nwwrap = (du, u, p) -> begin nw(du, u, p, 0) nothing end initprob = NonlinearProblem(nwwrap, uflat(uguess), pflat(uguess)) initsol = solve(initprob) ``` exception = UndefVarError: `uguess` not defined in `Main.__atexample__named__gas_network` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] top-level scope @ gas_network.md:326 [2] eval @ ./boot.jl:430 [inlined] [3] #60 @ ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:803 [inlined] [4] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String) @ Base.Filesystem ./file.jl:112 [5] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})() @ Documenter ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:802 [6] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})() @ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170 [7] with_logstate(f::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}}, logstate::Base.CoreLogging.LogState) @ Base.CoreLogging ./logging/logging.jl:522 [8] with_logger(f::Function, logger::Base.CoreLogging.ConsoleLogger) @ Base.CoreLogging ./logging/logging.jl:632 [9] capture(f::Documenter.var"#59#61"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any}) @ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167 [10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document) @ Documenter ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:801
build: ../../../.julia/packages/Documenter/Bs999/src/utilities/utilities.jl#L44
failed to run `@example` block in src/generated/gas_network.md:333-335 ```@example gas_network u0 = NWState(nw, initsol.u, uguess.p) ``` exception = UndefVarError: `nw` not defined in `Main.__atexample__named__gas_network` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] top-level scope @ gas_network.md:334 [2] eval @ ./boot.jl:430 [inlined] [3] #60 @ ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:803 [inlined] [4] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String) @ Base.Filesystem ./file.jl:112 [5] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})() @ Documenter ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:802 [6] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})() @ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170 [7] with_logstate(f::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}}, logstate::Base.CoreLogging.LogState) @ Base.CoreLogging ./logging/logging.jl:522 [8] with_logger(f::Function, logger::Base.CoreLogging.ConsoleLogger) @ Base.CoreLogging ./logging/logging.jl:632 [9] capture(f::Documenter.var"#59#61"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any}) @ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167 [10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document) @ Documenter ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:801
build: ../../../.julia/packages/Documenter/Bs999/src/utilities/utilities.jl#L44
failed to run `@example` block in src/generated/gas_network.md:342-346 ```@example gas_network prob = ODEProblem(nw, uflat(u0), (0.0,24*3600), copy(pflat(u0))) sol = solve(prob, Tsit5(), tstops=[0,4,12,20,24]*3600) nothing #hide ``` exception = UndefVarError: `nw` not defined in `Main.__atexample__named__gas_network` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] top-level scope @ gas_network.md:343 [2] eval @ ./boot.jl:430 [inlined] [3] #60 @ ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:803 [inlined] [4] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String) @ Base.Filesystem ./file.jl:112 [5] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})() @ Documenter ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:802 [6] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})() @ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170 [7] with_logstate(f::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}}, logstate::Base.CoreLogging.LogState) @ Base.CoreLogging ./logging/logging.jl:522 [8] with_logger(f::Function, logger::Base.CoreLogging.ConsoleLogger) @ Base.CoreLogging ./logging/logging.jl:632 [9] capture(f::Documenter.var"#59#61"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any}) @ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167 [10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document) @ Documenter ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:801
build: ../../../.julia/packages/Documenter/Bs999/src/utilities/utilities.jl#L44
failed to run `@example` block in src/generated/gas_network.md:352-376 ```@example gas_network xticks = ((0:4:24)*3600, string.(0:4:24)) # its nice to display hours fig = begin _fig = Figure() row = 1 ax = Axis(_fig[row, 1]; xlabel="time [h]", ylabel="pressure [Pa]", title="Pressure at nodes", xticks) xlims!(ax, sol.t[begin], sol.t[end]) ylims!(ax, 47.9e5, 49.9e5) for i in 1:3 lines!(ax, sol, idxs=vidxs(nw, i, :p); label="v$i", color=Cycled(i)) end axislegend(ax) row += 1 ax = Axis(_fig[row, 1]; xlabel="time [h]", ylabel="flow [m³/s]", title="Flow through pipes", xticks) xlims!(ax, sol.t[begin], sol.t[end]) ylims!(ax, 16, 44) for i in 1:2 lines!(ax, sol, idxs=eidxs(nw, i, :q̃); label="e$i flow", color=Cycled(i)) end axislegend(ax, position=:rb) row += 1 _fig end ``` exception = UndefVarError: `sol` not defined in `Main.__atexample__named__gas_network` Suggestion: check for spelling errors or missing imports. Stacktrace: [1] top-level scope @ ./gas_network.md:358 [2] eval @ ./boot.jl:430 [inlined] [3] #60 @ ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:803 [inlined] [4] cd(f::Documenter.var"#60#62"{Module, Expr}, dir::String) @ Base.Filesystem ./file.jl:112 [5] (::Documenter.var"#59#61"{Documenter.Page, Module, Expr})() @ Documenter ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:802 [6] (::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}})() @ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:170 [7] with_logstate(f::IOCapture.var"#5#9"{DataType, Documenter.var"#59#61"{Documenter.Page, Module, Expr}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}, IOContext{Base.PipeEndpoint}}, logstate::Base.CoreLogging.LogState) @ Base.CoreLogging ./logging/logging.jl:522 [8] with_logger(f::Function, logger::Base.CoreLogging.ConsoleLogger) @ Base.CoreLogging ./logging/logging.jl:632 [9] capture(f::Documenter.var"#59#61"{Documenter.Page, Module, Expr}; rethrow::Type, color::Bool, passthrough::Bool, capture_buffer::IOBuffer, io_context::Vector{Any}) @ IOCapture ~/.julia/packages/IOCapture/Y5rEA/src/IOCapture.jl:167 [10] runner(::Type{Documenter.Expanders.ExampleBlocks}, node::MarkdownAST.Node{Nothing}, page::Documenter.Page, doc::Documenter.Document) @ Documenter ~/.julia/packages/Documenter/Bs999/src/expander_pipeline.jl:801
build: ../../../.julia/packages/Documenter/Bs999/src/utilities/utilities.jl#L46
25 docstrings not included in the manual: NetworkDynamics.aliasgroups :: Union{Tuple{Vector{T}}, Tuple{T}} where T<:NetworkDynamics.ComponentFunction MTKExt.eq_type :: Tuple{Equation} NetworkDynamics.unique_mappings :: Tuple{Any, Any} NetworkDynamics.obsf :: Tuple{NetworkDynamics.ComponentFunction} NetworkDynamics.extract_nw :: Tuple{Any} NetworkDynamics.AnnotatedSym NetworkDynamics.filltype :: Tuple{Type{<:AbstractVector}} NetworkDynamics.hasfftype :: Tuple{Any} NetworkDynamics.equal_fields :: Union{Tuple{T}, Tuple{T, T}} where T NetworkDynamics._fill_defaults :: Tuple{Any, Any} NetworkDynamics.get_default_or_init :: Tuple{NetworkDynamics.ComponentFunction, Symbol} MTKExt._get_metadata :: Tuple{Any, Any} MTKExt.getproperty_symbolic :: Tuple{Any, Any} NetworkDynamics.compf :: Tuple{NetworkDynamics.ComponentFunction} NetworkDynamics.get_default_or_guess :: Tuple{NetworkDynamics.ComponentFunction, Symbol} MTKExt.lhs_var :: Tuple{Equation} NetworkDynamics.has_default_or_init :: Tuple{NetworkDynamics.ComponentFunction, Symbol} NetworkDynamics.dealias! :: Tuple{Vector{<:NetworkDynamics.ComponentFunction}} NetworkDynamics.compg :: Tuple{NetworkDynamics.ComponentFunction} NetworkDynamics.hash_fields :: Union{Tuple{T}, Tuple{T, UInt64}} where T NetworkDynamics._construct_comp :: Union{Tuple{T}, Tuple{Type{T}, Any}} where T MTKExt.MultipleOutputWrapper NetworkDynamics.dispatchT :: Tuple{T} where T<:NetworkDynamics.ComponentFunction NetworkDynamics.has_default_or_guess :: Tuple{NetworkDynamics.ComponentFunction, Symbol} NetworkDynamics._maybewrap! :: Tuple{Any, Any, Any} These are docstrings in the checked modules (configured with the modules keyword) that are not included in canonical @docs or @autodocs blocks.