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terms
input: input parameter(s) for a process
output: output from a process
cmdline: command line for executables
brain_only: image containing only the brain
segmentation: segmented image
parcellation: parcellated image
warp_field
transform
affine_transform
rigid_body_transform
realignment_parameters
contrast_image
contrast
statistic
t_statistic
F_statistic
z_statistic
surface
freesurfer_surface
vtk_surface
annotation: annotated surface
atlas
mni_atlas
talairach_atlas
probability_map
prior
template
t1_template
t2_template
glm_design
- number of regressors
slice_timing_correction
registration
normalization
model_estimation
timeseries_realignment
eddy_current_correction
surface_creation
dimensionality_reduction
smoothing
temporal_filtering
whitening
Functional (meta)analysis/publication terms (Tom Nichols) (more info here: functional analysis XML)
Citation: bibliographic reference
Atlas: atlas description
SearchVol: type and size of search region
Effect: One experimental result, statistic map or "contrast"
Peak: Description of a single peak location
Authors: Authors in the published study
Title: Title of the published study
Journal: Name of the journal of published study
Volume: Volume number of published study
Pages: Page numbers of published study
PMCID: PubMed Central reference number of published study
DOI: Digital object identifier of published study
Name: Canonical name of atlas space
Conversion: Name of transformation, if any, applied to place the coordinates in this space
Software: Name and version of software used to register
Template: Name of template image
WarpType: Type of warping
WarpName: Warping parameters
Type: Description of search volume
Voxels: Volume of search region, in voxels
Litres: Volume of search region, in litres
Resels: Volume of search region, in Resels
FWHM: Estimated noise FWHM
Name: Name of effect reported
SearchVol: If different search volumes are used for each effect
StatisticType: Type of statistic that is the basis of the inference
StatisticParam: Parameters of the statistic null distribution, if any.
StatisticThresh: Threshold applied to statistic image
CorrectionType: Type of multiple testing correction
InferenceType: Type of inference conducted
InferenceParam: Parameters that define each type of inference
InferenceLevel: Alpha-‐threshold; interpretation critically depends on InferenceType and CorrectionType; typically “0.05” if corrected
NumSubjects: Number of subjects contributing to this effect
Data: One or more instances of Peak element
X: Atlas location, X coordinate
Y: Atlas location, Y coordinate
Z: Atlas location, Z coordinate
Stat: Value of statistic at peak
Pvalue: Uncorrected P-‐value of peak; always voxel-‐wise
EquivZstat: Statistic value transformed into Z units
CorrPvalue: Corrected P-‐value of peak; dependent on Inference type