Update formatting.

Fixes ufs-community#915.

docs/source/ufs_utils.rst

@@ -692,21 +692,21 @@ Build UFS_UTILS and set 'fixed' directories
 -------------------------------------------
 
      * Invoke the build script from the root directory: ``./build_all.sh``
-     * Set the 'fixed' directories using the script in the 'fix' subdirectory: ./link_fixdirs.sh emc $MACHINE (where MACHINE is 'hera', 'jet', 'wcoss2', or 's4')
+     * Set the 'fixed' directories using the script in the 'fix' subdirectory: ``./link_fixdirs.sh emc $MACHINE`` (where MACHINE is 'hera', 'jet', 'wcoss2', or 's4')
 
 Configure for your experiment
 -----------------------------
 
-Edit the variables in the 'config' file (located in ./util/gdas_init) for your experiment:
+Edit the variables in the 'config' file (located in ``./util/gdas_init``) for your experiment:
 
-     * EXTRACT_DIR  - Directory where data extracted from HPSS is stored.
+     * **EXTRACT_DIR**  - Directory where data extracted from HPSS is stored.
      * **EXTRACT_DATA** - Set to 'yes' to extract data from HPSS. If data has been extracted and is located in EXTRACT_DIR, set to 'no'.
-     * RUN_CHGRES   - To run chgres, set to 'yes'.  To extract data only, set to 'no'.
-     * yy/mm/dd/hh  - The year/month/day/hour of your desired experiment.  Currently, does not support pre-ENKF GFS data, prior to 2012 May 21 00z.  Use two digits.
-     * LEVS         - Number of hybrid levels plus 1.  To run with 64 levels, set LEVS to 65.
-     * CRES_HIRES   - Resolution of the hires component of your experiment. Example: C768.
-     * CRES_ENKF    - Resolution of the enkf component of the experiments.
-     * UFS_DIR      - Location of your cloned UFS_UTILS repository.
-     * OUTDIR       - Directory where the coldstart data output from chgres is stored.
-     * CDUMP        - When 'gdas', will process gdas and enkf members. When 'gfs', will process gfs member for running free forecast only.
-     * use_v16retro - When 'yes', use v16 retrospective parallel data. The retro parallel tarballs can be missing or incomplete. So this option may not always work. Contact a UFS_UTILS repository manager if you encounter problems.
+     * **RUN_CHGRES**   - To run chgres, set to 'yes'.  To extract data only, set to 'no'.
+     * **yy/mm/dd/hh**  - The year/month/day/hour of your desired experiment.  Currently, does not support pre-ENKF GFS data, prior to 2012 May 21 00z.  Use two digits.
+     * **LEVS**         - Number of hybrid levels plus 1.  To run with 64 levels, set LEVS to 65.
+     * **CRES_HIRES**   - Resolution of the hires component of your experiment. Example: C768.
+     * **CRES_ENKF**    - Resolution of the enkf component of the experiments.
+     * **UFS_DIR**      - Location of your cloned UFS_UTILS repository.
+     * **OUTDIR**       - Directory where the coldstart data output from chgres is stored.
+     * **CDUMP**        - When 'gdas', will process gdas and enkf members. When 'gfs', will process gfs member for running free forecast only.
+     * **use_v16retro** - When 'yes', use v16 retrospective parallel data. The retro parallel tarballs can be missing or incomplete. So this option may not always work. Contact a UFS_UTILS repository manager if you encounter problems.