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elikreuz committed Aug 22, 2023
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2 changes: 1 addition & 1 deletion index.Rmd
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After creating a Conda environment, (additional) Python packages can be installed. There are three possible ways to install packages, which we list below.

* Using *Mamba* to install and manage Conda packages. This downloads Conda packages using Conda channels, which are URLs to directories containing the Conda packages. **Generally, installing Conda packages using *Mamba* is the preferred method.**
* Using *pip* to install packages and *Mamba* to manage these packages. *pip* is available for Windows, macOS and Linux. *pip* can also install [binary wheels on Windows](https://www.lfd.uci.edu/~gohlke/Pythonlibs). You should generally not install packages from *pip* in a Conda environment unless it's the last resort. This is because after you use *pip* to modify an environment, you can no longer use `Conda`/`mamba` to do so (trying that will break your environment, because *pip* does not communicate its changes to *Conda*). Hence install packages with `mamba` that you can first, and only then use `pip`, and then never touch the environment with `mamba` again (delete and start fresh if you need to).
* Using *pip* to install packages and *Mamba* to manage these packages. *pip* is available for Windows, macOS and Linux. *pip* can also install [binary wheels on Windows](https://www.lfd.uci.edu/~gohlke/Pythonlibs). You should generally not install packages from *pip* in a Conda environment unless it's the last resort. This is because after you use *pip* to modify an environment, you can no longer use `conda`/`mamba` to do so (trying that will break your environment, because *pip* does not communicate its changes to *Conda*). Hence install packages with `mamba` that you can first, and only then use `pip`, and then never touch the environment with `mamba` again (delete and start fresh if you need to).
* Using the distribution's package manager (only on Ubuntu, that is `sudo apt-get install python-*`).

The `mamba search` command searches a set of channels. By default, packages are automatically downloaded and updated from the default channel. To search for a package, type:
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6 changes: 3 additions & 3 deletions index.html
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<meta name="author" content="Jan Verbesselt, Jorge Mendes de Jesus, Aldo Bergsma, Johannes Eberenz, Dainius Masiliunas, David Swinkels, Judith Verstegen, Corné Vreugdenhil, Arno Timmer" />

<meta name="date" content="2023-08-21" />
<meta name="date" content="2023-08-22" />

<title>Python refresher</title>

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<h4 class="author"><em>Jan Verbesselt, Jorge Mendes de Jesus,
Aldo Bergsma, Johannes Eberenz, Dainius Masiliunas, David Swinkels,
Judith Verstegen, Corné Vreugdenhil, Arno Timmer</em></h4>
<h4 class="date"><em>2023-08-21</em></h4>
<h4 class="date"><em>2023-08-22</em></h4>



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Windows</a>. You should generally not install packages from <em>pip</em>
in a Conda environment unless it’s the last resort. This is because
after you use <em>pip</em> to modify an environment, you can no longer
use <code>Conda</code>/<code>mamba</code> to do so (trying that will
use <code>conda</code>/<code>mamba</code> to do so (trying that will
break your environment, because <em>pip</em> does not communicate its
changes to <em>Conda</em>). Hence install packages with
<code>mamba</code> that you can first, and only then use
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