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update fvsetup prompts and defaults for ladas
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    add a sample ladas input file to testsuites
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@saraqzhang
saraqzhang committed Feb 16, 2024
1 parent 380d12f commit 357bf9f
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36 changes: 7 additions & 29 deletions src/Applications/GEOSdas_App/fvsetup
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Original file line number Diff line number Diff line change
Expand Up @@ -340,6 +340,7 @@
# 26May2017 Sienkiewicz Additions for new radiance bias correction
# 25Jul2017 Holdaway Added resource files associated with NGGPS FV3 tlm/adjoint, sens and svec
# 19Jul2018 Wargan Additions for OMPS
# 2022,2024 sqz Additions for LADAS
#-------------------------------------------------------------------------
use Cwd qw(abs_path cwd);
use English;
Expand Down Expand Up @@ -3517,8 +3518,8 @@ sub set_ldasANA {
$ldasfdbk = 0;
$ldas_flag = 0;
$dflt = "n";
$ldashome = "NULL" ;
$ldashome4ens = "NULL" ;
$ldashome = "${fvhome}_LDAS" ;
$ldashome4ens = "${fvhome}_LDAS4ens" ;
print "\n-------------\n";
print "LDAS Analysis\n";
Expand All @@ -3535,11 +3536,11 @@ sub set_ldasANA {
$ldas_flag = 1;
}
$ans3 = query("LDAS HOME = ${fvhome}_LDAS , full path? ", $ldashome);
$ldashome = $ans3 ;
$ans3 = query(" LDAS HOME? [DEFAULT: $ldashome]");
$ldashome = $ans3 unless blank($ans3);
$ans4 = query("LDAS HOME for land ensemble = ${fvhome}_LDAS/run/atmens, full path? ", $ldashome4ens);
$ldashome4ens = $ans4 ;
$ans4 = query(" LDAS HOME for atmens? [DEFAULT: $ldashome4ens]");
$ldashome4ens = $ans4 unless blank($ans4);
}
return 0;
Expand Down Expand Up @@ -4487,29 +4488,6 @@ sub get_history {
$g5hist_rc = query(" Which template?", $g5hist_rc);
}
# verify that HISTORY.rc.tmpl has collections needed by LDAS
#-----------------------------------------------------------
if ( $ldas_ana == 1 ) {
$verify = 0;
@ldasinputs = qw / tavg1_2d_lfo inst1_2d_lfo /;
foreach $prod ( @ldasinputs ) {
open HIST, "< $fvroot/etc/$g5hist_rc";
unless ( grep /$prod/, <HIST> ) {
print "\n Required Land DAS inputs: @ldasinputs\n"
unless ($verify);
print " >>> WARNING <<< $prod not defined in $g5hist_rc\n";
$verify = 1;
close HIST;
}
}
if ($verify) {
print "\n"
. " 1. Use $g5hist_rc anyway\n"
. " 2. Select again\n\n";
$ans = query(" Choose option 1 or 2:", "2");
return 1 unless $ans eq "1";
}
}
print " Using HISTORY template: $g5hist_rc\n";
# query for GCMPROG.rc.tmpl (fcst HISTORY file)
Expand Down
237 changes: 237 additions & 0 deletions src/Applications/GEOSdas_App/testsuites/x3dvar_ladas.input
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@@ -0,0 +1,237 @@
#---------------
# x3dvar_ladas.input
#---------------

codeID: d8777e4
description: x3dvar_ladas__agrid_C180__ogrid_C
fvsetupID: 66ad870448

---ENDHEADERS---

Remote account for Intranet plots? [qzhang@train]
>

Is this a MERRA2 (1), GEOSIT (2), R21C (3) experiment? [0]
>

AGCM Horizontal Resolution? [C48]
> C180

AGCM Vertical Resolution? [72]
>

OGCM Resolution? [f]
> C

EXPID? [u000_C180]
> $expid

Check for previous use of expid (y/n)? [y]
> n

EXPDSC? [x3dvar_ladas__agrid_C180__ogrid_C]
>

Land Boundary Conditions? [Icarus_Updated]
> Icarus-NLv3

Catchment Model choice? [1]
>

FVHOME? [/discover/nobackup/qzhang/x3dvar_ladas]
> /discover/nobackup/qzhang/x3dvar_ladas

The directory /discover/nobackup/qzhang/x3dvar does not exist. Create it now? [y]
>

Processing nodes (1:Westmere, 2:SandyBridge, 3:Ivy Bridge, 4:Haswell, 5:Skylake, 6:Cascase)? [4]
> 5

Which case of variational analysis? [1]
>

Window of the variational analysis (min)? [360]
>

FVINPUT? [/discover/nobackup/projects/gmao/share/gmao_ops/fvInput_4dvar]
>

REAL TIME BCS? [/discover/nobackup/projects/gmao/share/gmao_ops/fvInput_4dvar/g5gcm/bcs/realtime/OSTIA_REYNOLDS]
>

agcmpert? [/discover/nobackup/projects/gmao/share/gmao_ops/fvInput_4dvar/agcmpert]
>

chemistry? [/discover/nobackup/projects/gmao/share/gmao_ops/fvInput_4dvar/chemistry]
>

g5chem? [/discover/nobackup/projects/gmao/share/gmao_ops/fvInput_4dvar/g5chem]
>

g5gcm? [/discover/nobackup/projects/gmao/share/gmao_ops/fvInput_4dvar/g5gcm]
>

PIESA? [/discover/nobackup/projects/gmao/share/gmao_ops/fvInput_4dvar/PIESA]
>

MERRA2? [/discover/nobackup/projects/gmao/share/gmao_ops/fvInput_4dvar/MERRA2]
>

AeroCom? [/discover/nobackup/projects/gmao/share/gmao_ops/fvInput_4dvar/AeroCom]
>

FVICS? [/archive/u/jstassi/restarts/GEOSadas-5_24_0]
> /home/dao_ops/d5294_geosit_jan18/run/.../archive/rs/Y2022/M04/d5294_geosit_jan18.rst.20220428_21z.tar

Run model-adjoint-related applications (0=no,1=yes)? [0]
>

Run analysis-sensitivity applications (0=no,1=yes)? [0]
>

Ending year-month-day? [20220425]
> 20220429

Length of FORECAST run segments (in hours)? [123]
>

Number of one-day DAS segments per PBS job? [1]
>

Number of PEs in the zonal direction (NX)? [8]
>

Number of PEs in the meridional direction (NY)? [48]
>

Job nickname? [g5das]
>

Run in split executable mode (1=yes;0=no)? [1]
>

Frequency of background fields (min)? [180]
>

Triangular spectral truncation? [254]
>

Analysis vertical levels (sig))? [72]
>

GSI grid resolution? [NA]
>

GEOS grid resolution instead? [d]
>

Ensemble Hybrid (<0;3=3dHyb;4=Hyb4d)? [-1]
>

Number of procs in the zonal direction (NX)? [12]
>

Number of procs in the meridional direction (NY)? [20]
>

Which main class of ObsSys (1: NRT; 2: MERRA; 3: MERRA-2; 4: GEOS-IT; 5: R21C)? [1]
>

OBSERVING SYSTEM CLASSES?
> disc_airs_bufr,disc_amsua_bufr,mls_nrt_nc,ncep_1bamua_bufr,ncep_1bhrs4_bufr,ncep_acftpfl_bufr,ncep_atms_bufr,ncep_aura_omi_bufr,ncep_avcsam_bufr,ncep_avcspm_bufr,ncep_crisfsr_bufr,ncep_gpsro_bufr,ncep_mhs_bufr,ncep_mtiasi_bufr,ncep_prep_bufr,ncep_satwnd_bufr,ncep_sevcsr_bufr,ncep_ssmis_bufr,ncep_tcvitals,npp_ompsnm_bufr

CHECKING OBSYSTEM? [2]
> 2

Which RADCOR option? [NONE]
>

Use sat channel-correlated observation errors (y/n)? [y]
>

Use aircraft bias correction (y/n)? [y]
>

Use unified radiance bias correction (y/n)? [y]
>

Land DAS Analysis (y/n)? [n]
> y

Enable LDAS feedback to model y/n ? [n]
> y

LDAS HOME ? [default: /discover/nobackup/qzhang/x3dvar_ladas_LDAS]
>

LDAS HOME for atmens ? [default: /discover/nobackup/qzhang/x3dvar_ladas_LDAS4ens]
>

Frequency (in days) for writing restarts? [0]
>

Frequency for PROGNOSTIC fields? [030000]
>

Frequency for surface (2D) DIAGNOSTIC fields? [010000]
>

Frequency for upper air (3D) DIAGNOSTIC fields? [030000]
>

Dimension of output in zonal direction? [1152]
>

Dimension of output in meridional direction? [721]
>

Would you like 2D diagnostics? [y]
>

Would you like 3D diagnostics? [y]
>

Would you like to compress diagnostics output files? [n]
>

Include GOCART tracers (CO,CO2,aerosols,etc) (y/n)? [y]
>

Select GOCART Emission Files to use: [OPS]
>

Do Aerosol Analysis (y/n)? [y]
>

AOD OBSERVING CLASSES [or type 'none']?
>

Enable GAAS feedback to model (y/n)? [y]
>

Which template? [HISTORY.rc.tmpl]
>

Which template? [GCMPROG.rc.tmpl]
>

Output Restart TYPE (bin or nc4) [nc4]
>

Select group: [g2538]
>

Continue without missing resource files? [y]
>

Edit COLLECTIONS list in run/HISTORY.rc.tmpl (y/n)? [n]
>

Edit COLLECTIONS list in fcst/HISTORY.rc.tmpl (y/n)? [n]
>

Edit files in run directory for CERES configuration (y/n)? [n]
>

Which? [Q]
>

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