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@Ferg-Lab

Ferguson Lab at the University of Chicago

Popular repositories Loading

  1. DiAMoNDBack DiAMoNDBack Public

    DiAMoNDBack: Diffusion-denoising Autoregressive Model for Non-Deterministic Backmapping of Cα Protein Traces

    Python 16 3

  2. LSS LSS Public

    Jupyter Notebook 7 2

  3. mfGPR mfGPR Public

    Multi-fidelity Gaussian Process Regression

    Python 6

  4. pines pines Public

    Permutationally invariant networks for enhanced sampling (PINES)

    C++ 5

  5. Protein_design_mmdVAE_torch Protein_design_mmdVAE_torch Public

    Jupyter Notebook 4

  6. molgen molgen Public

    Conditional Molecular Structure Generation

    Python 3

Repositories

Showing 10 of 16 repositories
  • mof-topology-prediction Public
    Ferg-Lab/mof-topology-prediction’s past year of commit activity
    Python 0 0 0 0 Updated May 28, 2024
  • snrv Public
    Ferg-Lab/snrv’s past year of commit activity
    Jupyter Notebook 0 BSD-3-Clause 1 0 1 Updated Apr 5, 2024
  • DiAMoNDBack Public

    DiAMoNDBack: Diffusion-denoising Autoregressive Model for Non-Deterministic Backmapping of Cα Protein Traces

    Ferg-Lab/DiAMoNDBack’s past year of commit activity
    Python 16 3 2 0 Updated Feb 29, 2024
  • integrin_molgen Public

    Deep generative modeling of large multi-molecular systems

    Ferg-Lab/integrin_molgen’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Nov 26, 2023
  • dMap_JAX Public

    Diffusion maps using JAX

    Ferg-Lab/dMap_JAX’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Nov 7, 2023
  • Protein_design_mmdVAE_torch Public
    Ferg-Lab/Protein_design_mmdVAE_torch’s past year of commit activity
    Jupyter Notebook 4 MIT 0 0 0 Updated Sep 8, 2023
  • pines Public

    Permutationally invariant networks for enhanced sampling (PINES)

    Ferg-Lab/pines’s past year of commit activity
    C++ 5 MIT 0 9 0 Updated Aug 25, 2023
  • ChromSTEM-Denoising-Autoencoder Public

    A denoising autoencoder using convolutional neural networks and molecular dynamics simulations to post-process ChromSTEM images and provide nucleosome-level resolution.

    Ferg-Lab/ChromSTEM-Denoising-Autoencoder’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Aug 25, 2023
  • activeLearningPFASLinear Public

    Data-driven discovery of linear molecular probes with optimal selective affinity for PFAS in water

    Ferg-Lab/activeLearningPFASLinear’s past year of commit activity
    Jupyter Notebook 1 1 0 0 Updated Aug 22, 2023
  • WorkCurveOptim Public
    Ferg-Lab/WorkCurveOptim’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated Jul 17, 2023
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