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@Ecological-Complexity-Lab

Ecological Complexity Lab

Our (new!) research group studies the complexity of ecological systems

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  1. infomap_ecology_package infomap_ecology_package Public

    Package with functions to handle network data and run Infomap, inspired by ecological networks

    R 25 2

  2. CRISPR_networks CRISPR_networks Public

    R 1

  3. emln emln Public

    An R package for handling and manipulating multilayer network data, mainly for ecological networks

    R 6

Repositories

Showing 10 of 14 repositories
  • eco_ILP Public

    Code and data for the paper "Inductive link prediction boosts data availability and enables cross-community link prediction in ecological networks"

    Ecological-Complexity-Lab/eco_ILP’s past year of commit activity
    Python 0 0 0 0 Updated Jul 21, 2024
  • lab_website Public

    Our lab website

    Ecological-Complexity-Lab/lab_website’s past year of commit activity
    HTML 0 BSD-3-Clause 0 0 1 Updated Jul 21, 2024
  • link_prediction_project Public

    Ofir and Eden Project of link prediction

    Ecological-Complexity-Lab/link_prediction_project’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Jul 18, 2024
  • Sequential_LP Public Forked from hexie1995/Sequential-Link-Prediction

    We present a temporal optimal link prediction method that is based on the stacking link prediction method.

    Ecological-Complexity-Lab/Sequential_LP’s past year of commit activity
    Python 0 MIT 1 0 0 Updated Jul 11, 2024
  • infomap_ecology_package Public

    Package with functions to handle network data and run Infomap, inspired by ecological networks

    Ecological-Complexity-Lab/infomap_ecology_package’s past year of commit activity
    R 25 2 11 0 Updated Jun 2, 2024
  • rumen_microbiome_structure Public

    this is a reiteration of microbiome_structure_v2 with cleaner folder tree and fixed intralayer edge weights.

    Ecological-Complexity-Lab/rumen_microbiome_structure’s past year of commit activity
    HTML 0 0 0 0 Updated May 7, 2024
  • cancer-networks Public
    Ecological-Complexity-Lab/cancer-networks’s past year of commit activity
    Jupyter Notebook 1 0 0 0 Updated Mar 28, 2024
  • emln Public

    An R package for handling and manipulating multilayer network data, mainly for ecological networks

    Ecological-Complexity-Lab/emln’s past year of commit activity
    R 6 CC-BY-4.0 0 0 0 Updated Nov 29, 2023
  • metabolic_corrs_networks_analysis Public

    sharon's project- creating networks of correlations between metabolites in different bacteria strains (before/after evolution) and analyzing them to catch the effect of evolution

    Ecological-Complexity-Lab/metabolic_corrs_networks_analysis’s past year of commit activity
    R 0 0 0 0 Updated Sep 28, 2023
  • Plasmid_multilayer_networks Public

    Data and scripts for analysis in Shapiro et al., "Multilayer Networks of Plasmid Genetic Similarity Reveal Potential Pathways of Gene Transmission"

    Ecological-Complexity-Lab/Plasmid_multilayer_networks’s past year of commit activity
    R 1 MIT 0 0 0 Updated Mar 28, 2023
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