1.0.0

Changelog

Added

• Added ObjABC, ObjFile and ObjDir classes to provide a base for any savable/loadable object.
• Added Group, Tissue, Field, Sensor, PointSensor and FEM classes to provide a way to generate realistic finite element model based on labelled volumes.
• Added ProbABC, CompABC, CompFilePath, CompGridSampler, CompSensors, CompTissueProp, CompTissues and ProbGetDP classes to define any problem.
• Added SolGetDP class to store information about the solution of a ProbGetDP problem.
• Added DistABC, DistConstant, DistNormal, DistTruncNormal and DistUniform to model random parameters for parametric problems.
• Added ProbParamABC, CompParamTissueProp, CompParamValue, and ProbParamGetDP classes to define any parametric problem.
• Added SolParamABC and SolParamGetDP classes to store information about the solution of a ProbParamABC problem.
• Added ProbEEGLeadfield and SolEEGLeadfield classes to solve the EEG forward problem.
• Added ProbParamEEGLeadfield, SolParamEEGLeadfield and SurrEEGLeadfield classes to solve the parametric EEG forward problem. Also added SurrEEGLeadfieldToRef class to evalaute the sensitivity of the EEG leadfield matrix.
• Added ProbHDTDCSSim and SolHDTDCSSim classes to simulate a HD-tDCS.
• Added ProbParamHDTDCSSim and SolParamHDTDCSSim classes to simulate a parametric HD-tDCS.
• Added SurrogateABC class to define any surrogate model based on a SolParamABC.
• Added SurrScalar class to define any surrogate model returning a scalar to perform sensitivity analysis.
• Added shamo-report command to facilitate bug report.
• Added automated full reference with sphinx autosummary.

0.3.1

Changelog

Hotfix

• Fix MANIFEST error.

0.3.0

Changelog

Added

• TruncatedNormalDistribution to model distributions from paper.

0.2.0

Changelog

Added

• MaternProd kernel to provide proper implementation of the kernel fr further computations.

Changed

• Use Halton sequence rather than quadrature rule to define evaluation points.
• The kernel used in parametric problems is now a compound of a constant kernel and a MaternProd kernel.

0.1.2

Changelog

This release is a bug fixing release for the CI/CD.

0.1.1

Changelog

Added

• Automated docker images build.
• Automated PyPI package build.
• Docstrings for non documented functions.

Changed

• Use black as a codestyle formatter.
• Use the src layout.

0.1.0

Changelog

Added

• Finite element model generation from labeled (segmented) images.
• EEG forward problem resolution.
• EEG parametric forward resolution and surrogate model generation.
• EEG simulation.
• Sphinx documentation.
• Examples for finite element model generation, EEG forward problem resolution, EEG parametric forward problem resolution and EEG simulation.